Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1590 ATGGTGAACGATAACGAACCCGCGAAGCTGCTGTTACCATACCTTCAACGCGCCGATGAATTGCAAAAGCACGAACCTCTCGTCGCTTATTACTGTCGATTATATGCGATGGAACGAGGATTGAAGATTCCACAGAGTGAACGCACCAAGACCACTAATGCTCTTCTTGTTTCTCTTATGAAACAACTTGAAAAGGATAAAAAGTCCACTCAGTTAGGGCCTGAAGATAATTTATATGTTGAGGGATTTGCTTTGAATGTGTTTGGAAAAGCAGACAAGCAAGATCGTGCTGGAAGAGCTGATTTGAATACAGCAAAAACATTTTATGCTGCTAGCATCTTTTTTGAGATTCTTAATCAATTCGGAGCGCTTCAGCCTGATCTGGAACAGAAACAGAAATATGCAGTCTGGAAAGCAGCAGATATAAGAAAGGCTTTGAAAGAAGGAAGGACGCCTATCGCTGGCCCACCTAATGGTGACGAGGATCTGTCAGTTCCTTTGAGTGCTCCTAGTAATAGATATGATCTCGGGGCTAACGAAACCACTGTTAACAGCTCTGGACCAGAATCTGATCCTTCAACTAATTATCATAACCCCATCAACTACCAGAATCTGCCAAACACTCATCCTGCACCTAAATTCCATGATACTGTTAACGACCACCATTCTTCAAACATTCCACCATCTGTGCAGTTTCATGAGGGAGTAAATAATAATAAGCATTCTTCCATTGTTTCTCCATCATCTCACCCTTATGCATCTGCAGGTTATCCTTCCCAAGACTACCATCCTCCTCCATCTTCCCAAGACTACCATCCTCCTCCATCTTCCCAAGACTACCATCCTCCTCCACCTTCCCAAGACTACCATTCTCCTCCATCTTCCCAAGACTACCATCCTCCTCCAACTTCCCAAGACTACCATCCTCCTCCACCTTCCCAAGAGTACCATCCTCCTCCACCTTCCCAAGATTACCATCCTCCTCCACCTTCCCAAGATTATCATTCTCCTCCATCTTCCCAAGATTACCATCCTCCTCCGCCTATGAGATCAGAAACTTCTTATCCTGAGCCCTACACCCATCAGCAGTACTCGCCAAAGAGTTCACAGCATTTAGGTCCTAACTACCCGTCTCATGAAACTTCCTCTTACCCCCATTTTCAGTCGTATCCAAGTTTTACCGAAAGCAGCCTACCATCAGTCCCAACAAATTATATGTATCACCAAAGTTCTGATCCTTCATTCTCTTCCCAGTCAGCTCCACTTACTACGAACCATCCATCAAGTGTCCAACACAGTTCCAGCAGCAGAAATGGAATAGTCTTGGAACCAACCCCAACTGCTCCGACATACCAGTATGACAGTAACTACCAGCCAACACCTGAAAAAATAGCCGAGGCACACAAGGCTGCAAGATTTGCTGTTGGGGCCCTGGCATTCGATGATGTGTCCATTGCAGTTGACTACCTAAAGAAATCACTTGAGTTGCTAACAAATCCATCTGCTGGTCAGTGA 1515 0.4495 MVNDNEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLVSLMKQLEKDKKSTQLGPEDNLYVEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGALQPDLEQKQKYAVWKAADIRKALKEGRTPIAGPPNGDEDLSVPLSAPSNRYDLGANETTVNSSGPESDPSTNYHNPINYQNLPNTHPAPKFHDTVNDHHSSNIPPSVQFHEGVNNNKHSSIVSPSSHPYASAGYPSQDYHPPPSSQDYHPPPSSQDYHPPPPSQDYHSPPSSQDYHPPPTSQDYHPPPPSQEYHPPPPSQDYHPPPPSQDYHSPPSSQDYHPPPPMRSETSYPEPYTHQQYSPKSSQHLGPNYPSHETSSYPHFQSYPSFTESSLPSVPTNYMYHQSSDPSFSSQSAPLTTNHPSSVQHSSSSRNGIVLEPTPTAPTYQYDSNYQPTPEKIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTNPSAGQ 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1590 504 Pfam Vta1 C-terminal domain 461 498 IPR041212 -
Lal18g1590 504 Gene3D - 5 152 IPR023175 -
Lal18g1590 504 MobiDBLite consensus disorder prediction 267 353 - -
Lal18g1590 504 Pfam Vta1 like 13 148 IPR039431 -
Lal18g1590 504 MobiDBLite consensus disorder prediction 174 210 - -
Lal18g1590 504 MobiDBLite consensus disorder prediction 221 266 - -
Lal18g1590 504 MobiDBLite consensus disorder prediction 355 459 - -
Lal18g1590 504 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 1 322 IPR044538 GO:0032511
Lal18g1590 504 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 311 502 IPR044538 GO:0032511
Lal18g1590 504 Gene3D Immunoglobulin FC, subunit C 460 499 - -
Lal18g1590 504 MobiDBLite consensus disorder prediction 148 459 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1590 7 118 Glycosyltransferase AT2G31960 27.273 3.71e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1590 K12199 - gmx:100783739 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1590 18 17437838 17450469 Lal18g1590 18 17437838 17450469 ECH