Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1582 ATGTTCTCCTTCTTTCACAAATCTTACACCATGCCTTCCCTCACCTTCATCTCTTTCCTTATCATCATCTCACTCTCTGCTTCTCCATCAGAAGCAGGTGGTTCTATCGGAGTAAACTACGGGACGATAGCGAACGACCTACCTCCGCCGTCAAAAGTGGTGGAACTTCTCAAAAGCCAGGGTCTCAACCGAGTTAAACTCTACGACACCGACGCCAATGTACTCACGGCTTTCGCCAACTCAGGAATCAAAGTAGTAGTAGCAATGCCCAACGAGCTCCTCTCCGCCGCCGCCGCCGACCAATCCTTCACCGACGCGTGGGTCCAAGCTAACATCTCAACCTTCCACCCCGCCACCGAAATCGAAGCAATCGCCGTCGGTAACGAAGTTTTCGCCAACTCAAACACCACCACCAATTATCTCGTCCCAGCCATGAACAATGTCTACGCCTCTTTAACCAAACTCAACTTAGACAAAGACATAAAAATATCTTCACCTATTGCTCTATCAGCGTTACAAACCTCTTACCCCACTTCAGCCGGTTCATTTAAACCAAACCTGGTCGAACCGGTTATTAAACCCATGCTTAATTTCCTTCGCCGAACCGGGTCTTATCTCATGGTGAACGCTTACCCCTTTTTCGCTTATGCTGACAACTCAGATCAAATATCTCTTGACTACGCACTCTTTAAACAAAACCCAGGTGTCGTTGATTCGGGTAACGGTTTCCGTTATATGAATTTGTTGGATGCTCAAATCGACGCTGTTTATGCTGCCATGTCAGCACTGAATTACGACGACGTTAAGATCACCGTTACAGAAACCGGTTGGCCGTCTAAAGGGGATTCCAATGAAATTGGAGCCGGTGAAGACAATGCGGCGTCGTATAATGGGAATTTAGTAAAGCGTGTTTTGACAGGGAGTGGGACTCCGTTAAGGCCCAATGACCCACTAACAGTGTTTCTGTTTGCGCTATTCAACGAGAACCAGAAACCCGGGCCCATATCTGAACGGAACTACGGGCTTTTCTACCCGAGTGAACAGAAGGTTTATGATATTCCGTTAACTTTGACGGAGGTAAATGTGAATTCGTCTGGTGTTGGGAAGAATGTGGTACCAGTGAATGAGAATAATGGTTCGACGACGTCGTATAATGGAGAGACATGGTGTGTAGCGAGTGGTAATGTTGGGAAGGAGAAATTACAGGGTGCACTTGATTATGCATGTGGTGAAGGTGGAGCTGATTGCACTCCCATACAAGAGGGTGCCACGTGTTATGATCCTAACACTTTGGAGGCACATGCTTCTTATGCTTTCAACAGTTACTATCAGAAGAACTCACGTGCTTCTGGCACCTGTCTTTTTGGTGGCGCTGCCTATGTAGTTACACATCCTCCTAAGTATGGGAAGTGCGAATTCCCCACGGGTTACTGA 1434 0.4721 MFSFFHKSYTMPSLTFISFLIIISLSASPSEAGGSIGVNYGTIANDLPPPSKVVELLKSQGLNRVKLYDTDANVLTAFANSGIKVVVAMPNELLSAAAADQSFTDAWVQANISTFHPATEIEAIAVGNEVFANSNTTTNYLVPAMNNVYASLTKLNLDKDIKISSPIALSALQTSYPTSAGSFKPNLVEPVIKPMLNFLRRTGSYLMVNAYPFFAYADNSDQISLDYALFKQNPGVVDSGNGFRYMNLLDAQIDAVYAAMSALNYDDVKITVTETGWPSKGDSNEIGAGEDNAASYNGNLVKRVLTGSGTPLRPNDPLTVFLFALFNENQKPGPISERNYGLFYPSEQKVYDIPLTLTEVNVNSSGVGKNVVPVNENNGSTTSYNGETWCVASGNVGKEKLQGALDYACGEGGADCTPIQEGATCYDPNTLEAHASYAFNSYYQKNSRASGTCLFGGAAYVVTHPPKYGKCEFPTGY 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1582 477 Pfam X8 domain 388 459 IPR012946 -
Lal18g1582 477 Pfam Glycosyl hydrolases family 17 36 353 IPR000490 GO:0004553|GO:0005975
Lal18g1582 477 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 470 IPR044965 GO:0004553|GO:0005975
Lal18g1582 477 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 19 470 - -
Lal18g1582 477 SUPERFAMILY (Trans)glycosidases 36 353 IPR017853 -
Lal18g1582 477 SMART X8_cls 388 473 IPR012946 -
Lal18g1582 477 Gene3D - 382 473 - -
Lal18g1582 477 Gene3D Glycosidases 34 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1582 Lal-Chr18 17402647 17404782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1582 34 477 Glycoside Hydrolase AT4G26830 69.213 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1582 - - gmx:100803406 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1582 18 17402647 17404782 Lal18g1582 18 17402647 17404782 ECH