Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1561 ATGAAGATTCCACACCACGCGCTTTCTCACTCAGATCTTCACCACGCTCCCAACAACACAAAACCCAAAACCCTATCCCGAACCCGTTTCAAGGGATTCGGGGCTCCGAAACTTAAACGGAGCACCCCCGAAACCCCTCTCTTGAAGTGGAAGATCAATGACCAAGACAGAACAAACTCTTCTTCGCTCACAGAGTCTGGTCGGAGCTCCACGAAGAAGCATAATGAAGTTGATGTGTCTGCACGGAGGCTTGTCGCCGGGCTGTGGCGGTTGCATATGCCGGATATGGAAATGAATGGTTACCGGAGGAATAAAGATCGGTTGGGACTTCAGCTTAATATCGGTGTGACTCATCTGCAGCATGGAATTGGCCATGTAGGCCTCCCATTCCATGGTCTTCCAAATGGCATTACTCATGGTTCTGCTCAGAAGAATATATGTCAAAGTCCGCGTTCCATCTCTGGGACAAAGAGCGGTCATTTCTGTGAGCCTGAGCCTTATTTCCAGTTTTCCAACACTGAAATGGAGGGTGCAACAAAGTGGGACCCTTCATGTTTAAAAACATTAGACGAGGCTCAACATATCTACAGCCACATGAAACTTGTTGACCACAAGGTAAGTGCCATTTCTGTTGTACCTGCTCTTGAAGCTGAACTGGAGCAGGCTCGTTCGCGAGTTCAGGAACTTGAGAACGAACGCCGCTCCTCCAAGAAGAAACTTGAACATTTCTTGAAGAAGGTAAGTGAGGAAAAGACCCAATGGCGAAGCAGAGAGCATGAGAAAATTCGTGAATACATTCATGACATGAAATCAGAGTTAAACCGAGAAAGGAAAAGCCGCCAAAGGATTGAAATTGTCAATTCAAGATTAGTTAATGAGTTGGCAAATGTCAAACTATCAGCAAAGCGCTACATGCAGGATTACGAGAAGGAAAAGAAGGCTAGAGAATTGATTGAGGAAGTGTGTGATGAACTTGCCAAGGAAATCGGAGAAGACAAAGCTGAAGTTGAAGCATTGAAGAGAGAATCTTTTAAATTTAGGGAAGAGGTGGAAGAGGAGAGAAGGATGTTACAGATGGCTGAAGTTTGGCGCGAAGAACGTGTTCAAATGAAGTTGATAGATGCAAAAATTGCTCTTGAAGAGAAATATTCATATATGAATAAACTTGTAGCAGATTTGGAAACTTTTCTTAAGTCAAGAGGCCTGAATCCGAACTCGAAGGAGATGAGAGAAGCACAGTCACTTCAACAAGCTGCCGCTGCAATGAACATTCAAGACATCAAGGGATTTTCATATGAGCCCCCTAATTCAGAAGATATGTTTGCCATTTTTGATGAAAATTTTGGTGAGCACATTGAGAGGGATATTGAGCCTTGTGTTTCTCACAGTTCTACTAGTCATGCCTCGAAGATTCTCAGGGTGAGCCCTGAAGCCAATTTAGGAAGTAAGGATGGCATTCAGAGTCGTTCTGGCGTATTTATGGGTGACAATGGTGATATAGATGGAGAGGAAAGTGGATGGGAAACTGTGAGCCATGCTGAGGATCAGGGCTCAAGCTATTCACCAGAAGGGAGTGCCCAATCTTTGAGCAAGAATCACCGGGAGAGTAATGTCTCGAGGAGGAGTGTGCTGGAATGGGAACAAAATGCAGGTGAGGAAACACCAATAACTGAAATTAGTGAAGTCTGCTCTATACCAACTAAGCAATCAAAGAAAGTGTCATCCATAGCGAGGCTTTGGAGGTCAGGCGTAAACAATGGGGATAATTATAGGATAATCTCTGTGGACGGGATAAACGGAAGGCTTTCAAATGGAAGGTTATCTAACGTGGGAATCATGTCTCCTGACTATGGATCAGGTAAAGGTGGACCAAGTCCCCAAGACCTGCTATATCAATTGAGCTCTCCTGAATCAGGAAATCCACATTCACATGGAGGTATGAAAGGATGCATTCCTCGTAGTACACAAAAGAATAGTTTGAAATCCAAACTTTTGGAGGCTAGGGTGGAGAGCCAGAAGTTTCAGTTGCGGCACGTGCTCAAACAGAAGTATTAG 2055 0.4448 MKIPHHALSHSDLHHAPNNTKPKTLSRTRFKGFGAPKLKRSTPETPLLKWKINDQDRTNSSSLTESGRSSTKKHNEVDVSARRLVAGLWRLHMPDMEMNGYRRNKDRLGLQLNIGVTHLQHGIGHVGLPFHGLPNGITHGSAQKNICQSPRSISGTKSGHFCEPEPYFQFSNTEMEGATKWDPSCLKTLDEAQHIYSHMKLVDHKVSAISVVPALEAELEQARSRVQELENERRSSKKKLEHFLKKVSEEKTQWRSREHEKIREYIHDMKSELNRERKSRQRIEIVNSRLVNELANVKLSAKRYMQDYEKEKKARELIEEVCDELAKEIGEDKAEVEALKRESFKFREEVEEERRMLQMAEVWREERVQMKLIDAKIALEEKYSYMNKLVADLETFLKSRGLNPNSKEMREAQSLQQAAAAMNIQDIKGFSYEPPNSEDMFAIFDENFGEHIERDIEPCVSHSSTSHASKILRVSPEANLGSKDGIQSRSGVFMGDNGDIDGEESGWETVSHAEDQGSSYSPEGSAQSLSKNHRESNVSRRSVLEWEQNAGEETPITEISEVCSIPTKQSKKVSSIARLWRSGVNNGDNYRIISVDGINGRLSNGRLSNVGIMSPDYGSGKGGPSPQDLLYQLSSPESGNPHSHGGMKGCIPRSTQKNSLKSKLLEARVESQKFQLRHVLKQKY 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1561 684 MobiDBLite consensus disorder prediction 52 68 - -
Lal18g1561 684 Coils Coil 308 356 - -
Lal18g1561 684 PANTHER GB|AAF24581.1 23 683 IPR043424 -
Lal18g1561 684 Coils Coil 212 246 - -
Lal18g1561 684 MobiDBLite consensus disorder prediction 635 657 - -
Lal18g1561 684 MobiDBLite consensus disorder prediction 480 542 - -
Lal18g1561 684 MobiDBLite consensus disorder prediction 511 533 - -
Lal18g1561 684 PANTHER ACTIN CYTOSKELETON-REGULATORY COMPLEX PAN-LIKE PROTEIN 23 683 - -
Lal18g1561 684 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1561 Lal-Chr18 17293044 17297094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1561 - - gmx:100799140 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1561 18 17293044 17297094 Lal22g0085 22 530243 538099 ECH
Lal18g1561 18 17293044 17297094 Lal18g1561 18 17293044 17297094 ECH
Lal18g1561 18 17293044 17297094 Lal18g1561 18 17293044 17297094 PCT