Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1558 ATGAATGATATGGAAGTGAAGTTGGTTCTGATTCACACGCTTGGTTTGTTACTACTCTGTGCAACTGTAACAGCAAATTATGTTCGCCCTTTGCCTCGAAAACCCTTACACATCTCATCATCCCACTCCAATCACCCTCATCAGGTACATATTTCTCTGGCAGGAATCAACCACATGAGAGTTACCTGGATAACCAATGATAAAAACTCACCTTCATATGTAGAATATGGCATATCACCTGCTAGATATGACACGGTGGCTGAAGGAGAGTACACCTCTTATAGTTATATGTTATATAGTTCGGGAAAGATACACCACACTGTCATTGGTCCCCTGGAACACAATACTACGTACTTTTACCGATGTGGCGGTTATGGTCCTGAGTTCCAACTTAAAACCCCTCCAGCTCAATTTCCGGTTACTTTTGCTGTGGCTGGGGATCTTGGTCAAACTGGTTGGACTAAATCGACATTAGACCACATTGATCAATGTAACTATGATGTCTACCTGCTTCCAGGAGATCTTTCATATGCCGATCGAATGCAACATCTATGGGACACATTTGGTGAGCTAGTGGAGCCACTTGCTAGTACAAGGCCATGGATGGTAACACAGGGGAACCATGAAAAGGAGAACATACTTTTGTTAGAGGATGGGTTTGTGTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGTGGATCAACTTCAAATCTCTATTATTCTTTTGAAACTGCAGGCGTTCACATCATAATGCTTGGTTCCTATGCTGATTATGATGAGTATTCAGAACAATACAGATGGCTAAATGCAGATTTGTCAAAGGTGGACAGGGAAAGGACACCTTGGCTGCTTGTGTTATTTCATGCACCATGGTATAATAGTAACAGGGCTCATCAAGGTGAAGGGGATGATATGATGGCTGCTATGGAGCCATTGCTTTATGCTGCCGGTGTTGATATAGTTCTAGCTGGTCATGTTCATGCTTATGAACGTTCGAAACGTGTTTATAATGGAGGATTGGATCCCTGTGGTGCTGTTCATATAACTATTGGCGATGGAGGAAACAGAGAAGGTTTAGCCCATAGGTATATAAACCCACAGCCAAAGTGGTCTGAATTCCGTGAAGACAGTTTTGGACATGGCGAGTTGAAGATTGTAAACTCCACTCACGCCTTCTGGAGTTGGCACAGGAACGATGATGATGAGGCAGTAAAAGTTGATGATATATGGATAACCTCTTTGGTCAGCTCAGGATGTCTTGATAAAAAGAGACTTAAACTGATGAACATACTTACAAACCAAGCCACCGAGACTGATGCTTTCATTTATCAACTGGTGGAATAG 1350 0.423 MNDMEVKLVLIHTLGLLLLCATVTANYVRPLPRKPLHISSSHSNHPHQVHISLAGINHMRVTWITNDKNSPSYVEYGISPARYDTVAEGEYTSYSYMLYSSGKIHHTVIGPLEHNTTYFYRCGGYGPEFQLKTPPAQFPVTFAVAGDLGQTGWTKSTLDHIDQCNYDVYLLPGDLSYADRMQHLWDTFGELVEPLASTRPWMVTQGNHEKENILLLEDGFVSYNSRWKMPFEESGSTSNLYYSFETAGVHIIMLGSYADYDEYSEQYRWLNADLSKVDRERTPWLLVLFHAPWYNSNRAHQGEGDDMMAAMEPLLYAAGVDIVLAGHVHAYERSKRVYNGGLDPCGAVHITIGDGGNREGLAHRYINPQPKWSEFREDSFGHGELKIVNSTHAFWSWHRNDDDEAVKVDDIWITSLVSSGCLDKKRLKLMNILTNQATETDAFIYQLVE 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1558 449 SUPERFAMILY Metallo-dependent phosphatases 139 404 IPR029052 -
Lal18g1558 449 Gene3D - 45 136 - -
Lal18g1558 449 PANTHER ACID PHOSPHATASE RELATED 10 427 IPR039331 GO:0003993
Lal18g1558 449 Gene3D - 137 421 IPR029052 -
Lal18g1558 449 Pfam Calcineurin-like phosphoesterase 141 331 IPR004843 GO:0016787
Lal18g1558 449 Pfam Iron/zinc purple acid phosphatase-like protein C 347 404 IPR025733 -
Lal18g1558 449 CDD MPP_PAPs 137 415 IPR041792 -
Lal18g1558 449 Pfam Purple acid Phosphatase, N-terminal domain 46 126 IPR015914 GO:0003993|GO:0046872
Lal18g1558 449 PANTHER PURPLE ACID PHOSPHATASE 10 427 - -
Lal18g1558 449 SUPERFAMILY Purple acid phosphatase, N-terminal domain 35 135 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1558 Lal-Chr18 17265237 17267817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1558 44 426 Miscellaneous Gene Families AT2G03450 26.915 9.77e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1558 K22390 - gmx:100787977 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1558 18 17265237 17267817 Lal18g1558 18 17265237 17267817 ECH
Lal11g0718 11 7115647 7120879 Lal18g1558 18 17265237 17267817 PCT
Lal18g1558 18 17265237 17267817 Lal11g0718 11 7115647 7120879 PCT