Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1549 ATGGCAGTGAGCCTTGATATGCTTAGTCTTCTGCCAGATCCATTGCTAATTATCATCATTTCCTTGCTTCCCTTCAAGGAAGCTATTAGAACTTCTGTATTTTCTAAAAGTTGGTGCAACAACAAGTTGTTCAAATTAACAACCAATATAGAGTTCAATGAACTCTTTTTTGTTAAATCTTATCAGCCCTCTATTAAACATCTTCAAAGAAAGGCTTTTCTTGATTTCATAACGTTTTGGATTGATAATAACAAAGAATCTATCATTGAGAAGTTTTCTTTGAAGTTATCAATGCCTAACAATGTTAGTGAGCTCACAGAAAAATGCATTGCTTTTGCCACACATAAGGGTGGGGTAAAACATCTAGAGCTTGATTTTTCTGATCCAAAATGGGTTGAATACAATAACGTTGCACCATATCATAAATTTCATGAGCCAATGTTTGCATTGCCTAAGCATGTTTATGATGAGCTTAAAGGTATTCAAATATTGAAGCTGTATTCATGTCGTTTTGTTGAGAAAGATTTGCTAAACTTTCATGCACTGAAAGAAGTTTCTTTTGGGTGGATGGAAGTGTCAATCTTTCTTATTAATTCTTTGATTTCAAATTGCAAAATGCTTGAAAGTTTGAGTCTGAAGAGGTGCTGGAATTTCAGTGAGTTTTATTTAAGGGATAGAAATCAAAAGCTAAAGAAGTTGGTGGTTGATAATTGTTCTTTTCAATATGAACTTTTCAGAGTGGTAGCACCAAATCTTAAGTTTTTCAAATATAGTGGAATGATGAGCTATTTTGACATAAAAGGGTGTCCACAAGTGGAAGTAGCAGACCTTGATTTCTCCACTGAATTTGGATTTGGTGGAAAAGGTTATCGTCTTTACAATTTCATGGAAGATTTCTATTCACTCAAAGTTTTAACTGTATGTAGCTACTTCCTCCAGGTTATTCCACATGGAAGCGATATGTTACGTATGGAACGTAACTTCAACATAAGACATTTGACAATAAAGACACAATTGAACAAGAGTGACTATAGGGGAATTGTATTCATGCTCAGAAGCTGCCCTATGTTACAATGCCTCACCATTCAACTAGGCTGTGCTAGAATTTGGCCTAATTACGCGCAACCATTTGCTTCTGCACCTAAGAATTTCTGGACAGAGAATGTAAGAATCTATGAATGCTTGAAATCAAGCCTAGAGGTTTTGGAGGTAAAGGGGTTCCAAGGCTTTGATAAGAGTGAGATTCGCATGTTGGCCTATTTCATCCAAAGTGGAAAAGTACTAAAAAAAATGACTATCAATATGGAAAAGGATATTATTCTAAGCTGCAATAGGAATTTGGATCTTAATCCACGTAAATTTGCAGAGTTCTTATTGAAAGTTCCAAGGGCTTCTACTGATTTGGAGATAACTATTTGTTAA 1422 0.3502 MAVSLDMLSLLPDPLLIIIISLLPFKEAIRTSVFSKSWCNNKLFKLTTNIEFNELFFVKSYQPSIKHLQRKAFLDFITFWIDNNKESIIEKFSLKLSMPNNVSELTEKCIAFATHKGGVKHLELDFSDPKWVEYNNVAPYHKFHEPMFALPKHVYDELKGIQILKLYSCRFVEKDLLNFHALKEVSFGWMEVSIFLINSLISNCKMLESLSLKRCWNFSEFYLRDRNQKLKKLVVDNCSFQYELFRVVAPNLKFFKYSGMMSYFDIKGCPQVEVADLDFSTEFGFGGKGYRLYNFMEDFYSLKVLTVCSYFLQVIPHGSDMLRMERNFNIRHLTIKTQLNKSDYRGIVFMLRSCPMLQCLTIQLGCARIWPNYAQPFASAPKNFWTENVRIYECLKSSLEVLEVKGFQGFDKSEIRMLAYFIQSGKVLKKMTINMEKDIILSCNRNLDLNPRKFAEFLLKVPRASTDLEITIC 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1549 473 Pfam FBD 393 433 IPR006566 -
Lal18g1549 473 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 2 422 - -
Lal18g1549 473 SUPERFAMILY F-box domain 4 40 IPR036047 GO:0005515
Lal18g1549 473 PANTHER F-BOX PROTEIN-LIKE 2 422 - -
Lal18g1549 473 SUPERFAMILY RNI-like 158 431 - -
Lal18g1549 473 SMART 9598neu4hmm 393 473 IPR006566 -
Lal18g1549 473 Gene3D Ribonuclease Inhibitor 94 434 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1549 Lal-Chr18 17225446 17227328 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1549 - - lang:109341958 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1549 18 17225446 17227328 Lal18g1549 18 17225446 17227328 ECH