Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1337 GGATTTGTTTCATTTCAGTATTCTGCTGGTGAATTCCAAGCAGATCTGTTTGTCAAAATGGGACATCTAGAGTCGCATACGCGAACTAGTATCAACGCAATAGGAGAGGAAAATGGGCATATCGATGCTGGATATCCTAAGACAGCCACTGTTGCATGCATTATCAATGCCGAAATTGGTGCTGTTTTGGCAGTCATGCGAAGAAATGTTAGATGGGGAGTTCATTATATGTCAGATGATGATCAGTTGGAGCATTCCCTTGTTCAGTCTTTGAAGTCATTAAGGAGGCAAATTTTTTCATGGCAGAATCAGTGGCATGGAATCAGCCCGGCTTTGTATCTCCAGCCTTTTCTGGATGTGATTCAATCAGAAGAAACTGGTGCACCCATTACTGGTGTTGCTCTGTCTTCTGTTTACAAGATCTTAACTCTGGATGTAATTGATCAAAACACTGTTAAGGTTGGGGATGCCATGCATTTGGTTGTCGATGCTGTCACAAGTTGCAGATTCGAGGTGACTGATCCTGGATCCGAAGAAGTGGTATTAATGAAGATATTACAAGTTCTTCTAGCTTGTGTGAAAAGTAAAGCGTCTTTAATGTTGAGTAACCATCATATTTGCACCATAGTGAATACTTGTTTCCGTATCGTTCATCAAGCAGGAACGAAAGGTGAGTTGTTGCAGCGGATAGCCCGTTACACAATGCATGAACTTGTTCGGTGTATTTTCTCTCACCTTCAAGATATTAACAGCACAGAGCATGCATTGGTAAATGGGAGCAGTACTTTAAAACAAGAGACTGGTGGGCTAAATGATGAACAAAATTCTGCAAGTGTACAATTGGAGAATGGGAGCTTGAATTCTGTAAGTGATGGTGAACCCTTATCTACAGGTATTGTTTCCAGTACTGTTGGTGTTGTGACAGCAGCCGTTGTGGATGAAAACACAGCTATTGCTAGCAACGGCAAGGAGACTGATCTGCTTGAATTGCAGACCACTACTGGACCATATGGTATTCCCTGCATGGTGGAAATATTTCACTTCTTGTGTTCTTTGTTGAATGTTGTTGAGCATATGGGAATGAATCCTCGATCAAACACAATAGCATTTGATGAAGACGTGCCTCTTTTTGCCTTAACTTTGATAAATTCAGCCATAGAGTTAGGAGGGCCCTCTTTTCAACTACATCCTAGATTGCTGAGTTTAATTCAGGATGAATTATTCCACAATCTTGTGCAATTCGGTTTGTCAATGAGTCCCCTTGTACTTTCAATGGTGTGTAGCATTGTTCTAAATTTGTATCACCATCTTCGTACGGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGGCTTGCACAAAGCAAGTATGGAGCTTCATTTCAGCAACAGGAAGTTGCCATGGAGGCCCTTGTTGACTTTTGCAGGCAAAAGACATTCACATTGGAGATGTATGCCAACTTCGACTGTGACTTAACATGCAGTAATGTATTTGAAGACATTGCTAATTTGTTGTCCAAAAGTGCATTTCCTGTGAACAGTCCACTGTCTTCAATGCATGTTCTTGCTTTGGATGGTCTTATTGCTGTCATACAGGGAATAGCTGAAAGGATAGGCAATGGATCTTTAAGTTCAGAAAATTTTGCTGTGAATCTTGAAGAGTATACTCCATTCTGGCTGGAAAAGTGTGAAAATTTCAGTGATCCAAATAATTGGGTTCCTTTTGTTTGCCGAAGAAAGTACTTCAAGAAAAGGTTGATGATTGGAGCTGATCATTTTAATCGTGATATTAAGAAAGGCCTTGAGTTTCTCCAAGGAACACATCTCTTACCTGACAAACTTGATCCCCAAAGTGTTGCATGGTTATTCAGATACACTCCTGGGCTAGATAAGAATCTCATTGGTGATTACCTAGGAAACCATGACGAATTCTGCGTTCAGGTTCTTCATGAATTCGCTAGAACATTTGATTTCAAAGACATGACATTGGACAACGCACTGCGGTTATTTTTGGAGACTTTCAGACTACCTGGAGAATCACAGAAGATACAGAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAGTTGCCTCATATCCTTGCCAACAAGGATGCTGCTCTCTTGTTATCATACTCTATTATAATGCTTAATACAGATCGTCACAATGCGCAGGTCAAGAAGAAGATGACAGAAGAGGATTTTATCCGAAATAATAGGCGAATAAATGGTGGCAATGATCTACCTCGAGAATACCTGTCAGGTCTTTACCATTCAATCTGTAAGAATGAGATCCGCACAACTCGTGAGCAAAGTTCTGGATTTCCTGAAATGACTTCAAGTAGGTGGATTTATGTCATGCACAAGTCAAAAATCTCTGCTCCATTCATTGTTTCTGATTCCAGAGCATACCTCGATTATGATATGTGTGCTATGTTGTCTGGTCCTACAATTGCTGCAATTTCTGTGGTATTTGATAATGCTGAAAATGAGGAGGTATACCAAACGTGTATGGATGGATTCTTAGCTGTTGCGAAGATATCAGCTCACTATCATCTTGAAAATGCACTGGATGATTTGGTTGTGTCTCTTTGTAAGTTCGTTACTATTTTGGATCCATTATCTGTGGAGGAGTCAATCCTAGCCTTTGCAGATGACAAAAAAGCAAGAATGGCAACTGAGACAGTTTTCACTATTGCGAATATGCATGGTGATTACATCCGCACTGGGTGGAGGAATATTCTTGACTGTATCTTAAGATTGCACAAATTAGGCCTTCTTCCTGCTCGTATGACCAGTGATGCGGCTGAGCAGTCAGAGCTTTCTACAGAAACTAGTCATGGGAAACAAAACACTAATTCTTTATCTTCAACCCATCTTCCATCTGTTAGTACTCCGAAGAGATCCTTGGGATTAATGAGCAGATTTAGTCAACTCTTATATCTTGGAGCTGAAGAGCCAAGATCAGTACCGACTGAAGAAGAACTTGCTGCTCAGCAGTGCGCTCTTCAAACAATACAAAAGTGTCACATTGACAGCATATTCACCAAGAGTAAATATTTGAAGCCTGAATCTCTATTGCAGCTTTCAAGAGCACTGATTGGTGCAGGAGAGCGACCTAAGAAAGGGTACAGAACTTCTGAGGATGAAGATACTTCAGTTTTCTGCCTGGAGTTACTTGTGGCAACCACTCTGAATAATAGGGATAGGGTTGAACTTCTTTGGCAGGGTCTTTATGAGCACATATCCAATATTGTTCAGTCAACTGTGATACCATGTGCACTGGTAGAGAAGGCTGTTTTTGGACTCTTGAGGATTTGCCACCGGTTACTTCCCTACAAAGAGAACATTACTGAAGAACTTTTGAGGTCCCTTCAACTTGTCCTAAAGCTTGATGCACGTGTTGCTGATGAATATTATGAACAGATTACACAAGAAGTCAATCACCTTCTGAAGGCAAATGCTTCTCATATTAGATCTCAGTTAGGATGGCGGAGTATTACGTCACTGCTTTCCATCACTGCTAGACACCTGGAAGCATCTGAGGCCGGATTTGATGCGCTATTGTTCATTATGTCAGATGGAGCCCACTTGCTTCCAGCTAATTATGTTCTCTGTGTGGATGCTGCAAAGCAGTTTGCTGAGTCTCGTGTTGGAGAGGTAGAGCGGTCTGTAATGGCACTTGATCTTATGGTAGGGTCTGTCGCTTGTTTAGAAAAGTGGACCAGTGATGCTAAGCAAGAATTGAAAGAAGAGGAAGTGGAAAAGATATTGCAGGATATTGGAGACATGTGGTTGAGGCTTGTACATGGACTAAGTAAACTATGCTTGGACCAGAGAGAGGAGGTTAGAAACCATGCATTGTTATCACTGCACAATTGCTTGACAGGATCGGTTGGGATACATCTCCCACATGATTTGTGGTTACAATGTTTTGATCAAGTGATCTTCACTGTGATTGATGAGCTGCTTGAAATTTCGCAGACACGGTCTCAAAAGGACTACAGGAACATGGAAGGAACACTTGTTCTTGCCTTGAAGCTCTTATGTAAAGTTTTCCTCCAGTTACTCCAAGACCTATCACAGTTGACAGACTTCAGCAAATTATGGTTGGGTGTACTAAGTCGGTTGGAAATATATATGAAGTTAAAAATTAGGGGAAGGAGAAGCGAGAAGATTCAAGAGCTTGTGCCTGAACTTCTTAAGAACACTTTGCTTGTTATGAAAGCAGGGGTCATACTAGTGCGGAGTAGTAGTGTAGATGGAAATAGTTTGTGGGAATTGACATGGCAGCACATAGATAACATTGCCCCGTCATTGCAGTCTGAAGTGTTCCCCGAGCAAGATTCAGAGGATTTGCAGCACAAACAATCTGAAACAGTTGGCAGTTTGGGGCCTGTTGAAAACATTTCTGTTCCTTCAAATGGAACTGCGGTCCAAGATGGTGGCGCTGGTGATGGTTAA 4479 0.4128 GFVSFQYSAGEFQADLFVKMGHLESHTRTSINAIGEENGHIDAGYPKTATVACIINAEIGAVLAVMRRNVRWGVHYMSDDDQLEHSLVQSLKSLRRQIFSWQNQWHGISPALYLQPFLDVIQSEETGAPITGVALSSVYKILTLDVIDQNTVKVGDAMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASLMLSNHHICTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRCIFSHLQDINSTEHALVNGSSTLKQETGGLNDEQNSASVQLENGSLNSVSDGEPLSTGIVSSTVGVVTAAVVDENTAIASNGKETDLLELQTTTGPYGIPCMVEIFHFLCSLLNVVEHMGMNPRSNTIAFDEDVPLFALTLINSAIELGGPSFQLHPRLLSLIQDELFHNLVQFGLSMSPLVLSMVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASFQQQEVAMEALVDFCRQKTFTLEMYANFDCDLTCSNVFEDIANLLSKSAFPVNSPLSSMHVLALDGLIAVIQGIAERIGNGSLSSENFAVNLEEYTPFWLEKCENFSDPNNWVPFVCRRKYFKKRLMIGADHFNRDIKKGLEFLQGTHLLPDKLDPQSVAWLFRYTPGLDKNLIGDYLGNHDEFCVQVLHEFARTFDFKDMTLDNALRLFLETFRLPGESQKIQRVLEAFSERYYEQLPHILANKDAALLLSYSIIMLNTDRHNAQVKKKMTEEDFIRNNRRINGGNDLPREYLSGLYHSICKNEIRTTREQSSGFPEMTSSRWIYVMHKSKISAPFIVSDSRAYLDYDMCAMLSGPTIAAISVVFDNAENEEVYQTCMDGFLAVAKISAHYHLENALDDLVVSLCKFVTILDPLSVEESILAFADDKKARMATETVFTIANMHGDYIRTGWRNILDCILRLHKLGLLPARMTSDAAEQSELSTETSHGKQNTNSLSSTHLPSVSTPKRSLGLMSRFSQLLYLGAEEPRSVPTEEELAAQQCALQTIQKCHIDSIFTKSKYLKPESLLQLSRALIGAGERPKKGYRTSEDEDTSVFCLELLVATTLNNRDRVELLWQGLYEHISNIVQSTVIPCALVEKAVFGLLRICHRLLPYKENITEELLRSLQLVLKLDARVADEYYEQITQEVNHLLKANASHIRSQLGWRSITSLLSITARHLEASEAGFDALLFIMSDGAHLLPANYVLCVDAAKQFAESRVGEVERSVMALDLMVGSVACLEKWTSDAKQELKEEEVEKILQDIGDMWLRLVHGLSKLCLDQREEVRNHALLSLHNCLTGSVGIHLPHDLWLQCFDQVIFTVIDELLEISQTRSQKDYRNMEGTLVLALKLLCKVFLQLLQDLSQLTDFSKLWLGVLSRLEIYMKLKIRGRRSEKIQELVPELLKNTLLVMKAGVILVRSSSVDGNSLWELTWQHIDNIAPSLQSEVFPEQDSEDLQHKQSETVGSLGPVENISVPSNGTAVQDGGAGDG 1492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1337 1492 ProSiteProfiles SEC7 domain profile. 579 768 IPR000904 GO:0005085|GO:0032012
Lal18g1337 1492 SUPERFAMILY ARM repeat 371 1362 IPR016024 -
Lal18g1337 1492 MobiDBLite consensus disorder prediction 942 971 - -
Lal18g1337 1492 Pfam Sec7 domain 587 770 IPR000904 GO:0005085|GO:0032012
Lal18g1337 1492 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 30 1479 - -
Lal18g1337 1492 Gene3D - 663 780 IPR023394 -
Lal18g1337 1492 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 340 501 IPR032691 -
Lal18g1337 1492 SUPERFAMILY Sec7 domain 584 777 IPR035999 GO:0005085|GO:0032012
Lal18g1337 1492 SMART sec7_5 583 770 IPR000904 GO:0005085|GO:0032012
Lal18g1337 1492 MobiDBLite consensus disorder prediction 1452 1492 - -
Lal18g1337 1492 CDD Sec7 587 770 IPR000904 GO:0005085|GO:0032012
Lal18g1337 1492 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 30 1479 - -
Lal18g1337 1492 Gene3D - 580 662 - -
Lal18g1337 1492 MobiDBLite consensus disorder prediction 1462 1483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1337 Lal-Chr18 15823371 15829814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1337 K18443 - gmx:100784083 2459.1