Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1189 ATGGTGAAAAACGACAAAGACGCAATGTTTAACGACGTCGTTCTCCAAATCGTTTTGGCTCTCGTAATGGCTCTCTCCTTTCTTTTCATGAACGATATTCCCAAGAAACTCTTCTCCAAGCTCCGTCTCAGAAACCGCACCAAAATCAAAGCCAAACACCACTTCGTCCAAGGCGCTCAGCTTCTCGCTCGAGCCAGATCCTCCACTTCTCGATCCCACGCTAATTCCTTAGCCAAACAAGCCCTAACCGAAGCCGAAAACGCCATCGCTCTTGATCCGAAAGACGCCGCAGCGTACCTTCTCAAATCGCTCGCGCTCGATATCCAAGGCTTCCGCGCCTCTGCTCTTGACTCGATGGATGTGGCTTTGTCGCCGCTCGCGGCGAAGTCGCTTAGCGATAGCGAGAGAGGAGACGCGTTTTTGAAGAGAGCGGAGTTGAAGATGAGGTTGGGGAAGGGAACGAGTCAGCGCGGTGGGGTTGACTCAGTGAAAGGAGATTTGGAAGAAGCGGTTAGGTTGAATCCGAAGAATTCTAGAACGTTTTGTGTTTTGGGAGAGTGGTATGAGGGGAAGAATATGAAGGAAGAAGCTGTTAAGGCTTATGAAGAGGCTATTCAATTGGAACCGGAATTGCGTGTGGCTAATGATGCGCTAAACAGGATTCATATGAAATAA 675 0.4933 MVKNDKDAMFNDVVLQIVLALVMALSFLFMNDIPKKLFSKLRLRNRTKIKAKHHFVQGAQLLARARSSTSRSHANSLAKQALTEAENAIALDPKDAAAYLLKSLALDIQGFRASALDSMDVALSPLAAKSLSDSERGDAFLKRAELKMRLGKGTSQRGGVDSVKGDLEEAVRLNPKNSRTFCVLGEWYEGKNMKEEAVKAYEEAIQLEPELRVANDALNRIHMK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1189 224 PANTHER - 10 221 - -
Lal18g1189 224 ProSiteProfiles TPR repeat profile. 178 211 IPR019734 GO:0005515
Lal18g1189 224 SMART tpr_5 178 211 IPR019734 GO:0005515
Lal18g1189 224 SMART tpr_5 144 177 IPR019734 GO:0005515
Lal18g1189 224 Gene3D Tetratricopeptide repeat domain 71 224 IPR011990 GO:0005515
Lal18g1189 224 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 10 221 - -
Lal18g1189 224 SUPERFAMILY TPR-like 79 222 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1189 Lal-Chr18 14762101 14762775 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1189 - - gmx:100783725 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1189 18 14762101 14762775 Lal18g1189 18 14762101 14762775 ECH