Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1188 ATGCACGGTCGTCCTCGTAAATCATTGAAACCAGAAGACACAACAGCTTTATCAGCCAAAGTCGAAAACCTTCGTTCACTTCATTCTCAATTCCTCACCAATCATCATAACCGCATATACACAAAGGAAGCTCTAGATTTGAATGCCAAGTTAGTTGAGAACAATCCAGAGTGGCACACTGCTTGGAATTACAGAAAAGTCGCCGTACAAAATTTCCTCTCTCCTTCGGAATCTGATCTTGATTACGTCAAATCCATCATCGATGAAGAACTCAGAGTGGTAGAGAGTGCATTGAGGAATAATTTTAAATCATATGGTGCATGGCATCATCGAAAATGGGTACTAAGCAAGGGGCATTCTTCCATAGATAACGAGTTGCGCCTTCTGGATGCTTTTCAGAAGCTTGATGGTCGAAATTTCCATGCTTGGAACTACAGAAGGTTTGTTACTGCACTGATGAAAAGATCTGATGAGGATGAGATGAAATACACAAAGGAACTGATAGACGATAATTTTAGCAATTACTCTGCATGGCACAATGCTGATGGGTATTTCCCGAAAGAGAATGTTTTGGAAGAGGAGTATGAGCTTGTCCAAAATGCTCTTTTTACCGATCCAGATGATCAGAGTGGCTGGTTTTATCATCTATGGCTTATTGATCAAACAGTGAAAACAGATGCTCCTATACTTGTTTCATCTTGGCCTTTCCATGGATCTACTATAACTTTACAGGGAAACAAGTGCCTTTATGGTTCTGGTCAAGCCGTTGAAGGCATCGACTCATCCACAGTAACTGTTAAATCTGAAGTTTTAAATGGTGATCTGGTTTGGAAACTGCTTTCAACAAGTAACTCGAATACTGCTCAAGTTTGGGTTACATATCTGAATGTTGGAAATATGGAGCTCCAGCTGTTGAAAAATTACTCTCTAGAGATCAGCCTTGGTCATTCTAAGGGTGTTGTCTCTTCAAGTGGATATCACTTTGGCCATCCTATGCATGTTTCCTTTAAACTGTGTATACAAACTGACTATACAGAACCTGCTGAAGGACAGTGTGAAAAAAAGACTTCATGGAATGATAATGATTTCCAAAAAATTGATCATTTTCAGGAATCAGAGTCCATTGTTTTCCGGCTCTTTCCTAGATTGAAAAGTCACTCTCAAAAAGCTCGCCTTACTGATCAACTAACTAGTGAGAACGACTACCATAATCAAACAACTTCCAACTGGTGTGTGGAGGCCATTGATAAAGAAGTAGATAAATTTCAAGATTTATTATCAGATTCGGACTGCAAACTTGGAAAGCTTATACTTGCTAGACTGTTGACTGCTCTTGATTCGCTATCATCTACATGTGCCGAGAAAATGATCCATGGTGATGAAGACAAGCGTACTCTGACATTACTTCATCAGATATCATCAACTAGGGGATCTTTACTACCATACTGCCACTACTGCAAAAATGCAGCAAAGACAATTGCTGGCCATGTTTGTCTGCGATTACAAAATTTATCATTATCACGGATTGGATGCATTGAGAATTTGTTGTGGGTGCAAATGCTAGACCTTAGCCACAATGAACTTCAATCAATTGAAGAATTTGCATGGGACCGTTTTGAAATCCTTGCCGGCAGCTTCAATGCCACAAAATTTTGGGAAGCTTTCTTGATATTTGGTAGTTTGAATTTGACAGAGTTAGACATAAACGGAAATGCAGTTGCTGATGAGAACTTCAAATTATTTCTTGTCAAAGTTTTGCCTACTCTAAAGTGGCTGGATGGTGGAGAATTATCTTGA 1797 0.3934 MHGRPRKSLKPEDTTALSAKVENLRSLHSQFLTNHHNRIYTKEALDLNAKLVENNPEWHTAWNYRKVAVQNFLSPSESDLDYVKSIIDEELRVVESALRNNFKSYGAWHHRKWVLSKGHSSIDNELRLLDAFQKLDGRNFHAWNYRRFVTALMKRSDEDEMKYTKELIDDNFSNYSAWHNADGYFPKENVLEEEYELVQNALFTDPDDQSGWFYHLWLIDQTVKTDAPILVSSWPFHGSTITLQGNKCLYGSGQAVEGIDSSTVTVKSEVLNGDLVWKLLSTSNSNTAQVWVTYLNVGNMELQLLKNYSLEISLGHSKGVVSSSGYHFGHPMHVSFKLCIQTDYTEPAEGQCEKKTSWNDNDFQKIDHFQESESIVFRLFPRLKSHSQKARLTDQLTSENDYHNQTTSNWCVEAIDKEVDKFQDLLSDSDCKLGKLILARLLTALDSLSSTCAEKMIHGDEDKRTLTLLHQISSTRGSLLPYCHYCKNAAKTIAGHVCLRLQNLSLSRIGCIENLLWVQMLDLSHNELQSIEEFAWDRFEILAGSFNATKFWEAFLIFGSLNLTELDINGNAVADENFKLFLVKVLPTLKWLDGGELS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1188 598 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 121 155 IPR002088 GO:0008318|GO:0018342
Lal18g1188 598 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 86 120 IPR002088 GO:0008318|GO:0018342
Lal18g1188 598 Gene3D Ribonuclease Inhibitor 462 598 IPR032675 -
Lal18g1188 598 Gene3D Protein prenylyltransferase 1 234 - -
Lal18g1188 598 PANTHER - 1 544 - -
Lal18g1188 598 Pfam Protein prenyltransferase alpha subunit repeat 191 221 IPR002088 GO:0008318|GO:0018342
Lal18g1188 598 Pfam Protein prenyltransferase alpha subunit repeat 158 180 IPR002088 GO:0008318|GO:0018342
Lal18g1188 598 Pfam Protein prenyltransferase alpha subunit repeat 88 116 IPR002088 GO:0008318|GO:0018342
Lal18g1188 598 Pfam Protein prenyltransferase alpha subunit repeat 123 150 IPR002088 GO:0008318|GO:0018342
Lal18g1188 598 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 156 189 IPR002088 GO:0008318|GO:0018342
Lal18g1188 598 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 190 224 IPR002088 GO:0008318|GO:0018342
Lal18g1188 598 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 1 544 - -
Lal18g1188 598 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 40 74 IPR002088 GO:0008318|GO:0018342
Lal18g1188 598 SUPERFAMILY L domain-like 497 595 - -
Lal18g1188 598 SUPERFAMILY Protein prenylyltransferase 9 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1188 Lal-Chr18 14755599 14761043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1188 K14050 - gmx:100807900 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1188 18 14755599 14761043 Lal18g1188 18 14755599 14761043 ECH