Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1184 ATGGAACATTCAGATTCAATGCAATGTGTGCGAGTCGCGGTCAACATTCGCCCTCTTGTTACATCTGAGCTTCTAATCGGATGCACCGATTGCATCTCTGTTGTTCCAGGAGAACCTCAGGTCCAAATTGGTTCCCATTCATTCACATATGATTATGTTTATGGTAGCATGGGGTCGCCGTTGTCTGCAATATACGATGATTGTGTATTTCCGCTTGTTGATGCACTCTTCCATGGTTATAATGCAACAGTTCTTGCATATGGCCAGACTGGATCTGGGAAAACCTACACAATGGGAACCAATTATACTGGGGAGGGAAGCAATGATGGAATAATACCGAGGGTGATGGAGACAATATTTAAAAAAATCCAAACCATGAAAGAATCCACCGAGTTTTTGATTCGAGTATCTTTTATTGAGATATTCAAGGAGGAGGTATTTGATTTGCTTGATCCCAACTCAACCAAAGGAGAAGTGTTATGTACCGCAAAGGTCACCATGCCAGCCAGAGTTCCTATACAAATCAGAGAAACGGCGAATGGTGGAATAACGCTGGCTGGTGTTACTGAACCTGAAGTTAAGACAAAAGAAGAAATGGCATCTTTTCTCTCACGTGGTTCATTAGCACGTGCCACTGGAAGTACAAATATGAACAGTCAATCAAGTCGTTCACATGCTATATTCACAATCACAATGGAGCAAAAGAATGGTGATGATGTCTTATGTGCCAAACTCCACCTAGTAGACCTTGCTGGTTCTGAGCGTGCAAAAAGAACTGGTGCAGATGGAATGCGTTTAAAAGAAGGCATTCATATCAACAAGGGTTTATTAGCTCTTGGGAATGTAATAAGTGCACTGGGAGATGAAAGAAAGCGAAAAGAAGGAGGTCATGTGCCATATCGTGATAGCAAATTAACACGCCTACTGCAGGACTCTCTTGGAGGAAACAGCAAAACTATGATGATAGCTTGTGTTAGTCCTGCTGACACCAATGCTGAAGAGACATTAAATACTTTAAAGTACGCAAATCGTGCTCGCAACATTCAAAACAAGGCAGTTATTAACCGCGATCCAGTGGGAGCTCAGGTGCAGAAAATGCGAAGCCAGATTGAGCAATTGCAGTCTGAGCTTCTCTTTTATAGAGGTGATGCTGGTGTACCATTTGAGGAACTCCAGATTCTTAAACACAAAATATCCTTACTTGAAGCAAGTAATGCGGAACTACAGCGGGAGCTTCGAGAAAATCGATTAACTTGTGACAATTTAGCACGGCGTGCTAGTGATGCTCAGGTTGAAAAGGACCAACTTGTCCTGAAAATAGAATCAGTTCGAAATGGTAAATCTTGGGATGAGGTTGACTCAAATACAAATCAGGATTACGACCTGGTGAAATCTTATGTGTCAAAAATCCAAGATCTGGAAGGAGAATTGCAGCGTTTGAAAAAATCAAACGTGAAATCTAGCCATTTCGTCGACTGGGCTGATTCAGACGATGGTGGATTCCGGTCAAAGAATGCTGTATTTGCATCTGGTAACGAGTATTCATCTGACTGTGATACGAGATCTGTGGACATAACAGATGACTTGGTAGATCATGCAAAGGAGTCTGAACACTCCTCTCTTCAAGAAAAGTTGGATAGGGAGCTGAAAGAATTAGATAAGAAACTAGAACAAAAAGAGGCTGAAATGAAGCGATTTAATAACTCTGATACTTCAGTTCTCAAGAATCATTATGAAAAGAAACTTCACGAGCTTGAACAAGAGAAGAAATTTCTACAAAAAGAAATTGAGGAACTTAGGTGCAATCTTTCAAATATTGCATCCACCTCTGATGCTGGTGCTCAAAAGTTAAAGGAAGATTATCTTCAAAAGTTGAATGCTCTTGAAGCACAGGTATCTGAGCTGAAGAAGAAGCAAGATTCTCAGGTTCAACTCTTGAGGCAAAAACAGAAAAGTGACGAGGCTGCAAAACGACTTCAGGATGAGATCCATAGAATTAAATGTCAGAAGGTCCAATTGCAACATAAGATTAAGCAGGAATCTGAACAATTTAGGTTATGGAAAGCTGCACGTGAAAAAGAAGTTCTTCAGCTTAAAAAAGAAGGGAGGAGGACTGAATATGAGATGCATAAGATGTTGGCATTGAATCAGAGGCAGAAGATGGTATTGCAAAGGAAGACAGAAGAAGCTTCCCTGGCGACAAAAAGGCTAAAAGAACTTTTGGAATCAAAGAAGCATTCTTCTCGTGAAACTGCAGGTGGCAATGGTCCCGGAATACAGGCTTTGATGCAGGCAATTGAGCATGAGCTTGAAGTCACTGTCCGAGTGCATGAAGTGCGTTTAGAATATGAGCGTCAAATGGCAGAGAGGGCTAAAATAGCTGAGGAAATTGCCAGATTAAAAGAAGAAGAAATGATGAAGCAAAACAACACAAGTGATAGCCTCATATCAATATCTCCGGGTGCAAGAAACTCAAGGATTTTTGCTCTTGAAAACATGCTTGAAGCTTCTTCTCCAACAGTGGTGTCTATGGGATCTCAGTTGTCAGCGGCAGAGGAGAGGGAACGAGTTTTCAGTGGCAAGGGACGTTGGAACCAAGTTCGGTCCCTTTCTGATGCCAAGAATGTGATGAATTATTTGTTCAATATAGCATGTTCGTCCAGGTGTTTATTGCGAGATAGAGAAGTTACCTGCAAAGAGAAGGACATGGAAATAAGAGATCTAAAAGAAAATGTAGTCAGGCTAAGATGTTCACTACAACAATCGGAAATGCAGAATGCTGAACTTATTCATCAGTTGAAGTTGCAGAGTTTTATGGGAGGACATAAGTATGACTTGCGCAAGCTGGAAAACCGTCGATCTATCATGTTATTTGAGGACATGGATATATCTGATGCAGAATCAGATGGTTATGATGTAGATGCAACTGATGACGAATGGGTAGAGTCAGGAAAGTTACAGGTTCGGAAAAGAAAATCTAAAAGTGGAAGATTAAGCATGGAAGATAATCAGACAAATAGCAGTTCAGATGATGTCAAAGATAATTCAAAAGGACTCGATTGTGCATCTGAGAAAACTGCATCAGATGTTTGCTGCTCTTGTAGTAAATCCTCGTCTTGCAAGACAACAAAATGCAAGTGCAGAGCTCTGGGTGGCAGTTGTGGGAGTTCTTGTGGTTGCCTAGCAACCAAGTGTACCAACAGAGCATCGGTCTCAAATGAGTCACAGGAGCCAACACAATATGGAGTTGAAGGAACTGGGAATGATTCTAGAATTGAGGATACAGACAAAGACCACATTCTTGCTACTCAGGGTGCCGAGTTGCTTCAAGGTGCACTAATTGCGAGGCCTGCTGAGACAAACAGTAATCGTGGGCCAAGAAAGCCTCTCTCGGACATTGGAAATACAATGGCCAAATCAAATGCTCAAAAAGGTAATCTGAGAAAGAAATGGAGGAAATCCTCAATAGTTCTTGTTTCAGATCCACCACATTCCTTGCAGACAAGTAATTCTGAAGTCCCCAAGAAAGAAAATGATAATATTAGTGAAACAAATGTCTCTGCCAGCAGACCACAGAACATGCACTCATATAGACCCGAAAATTCTTCAATTCCCTCCAAGACAGAGAATAATGTTATTGGGACAGATATTCCCTTGAGAATACCAAGGGCTATGCAAAGGCAAGTATCATCAAAAGTTAGTGTTCCATTGGGGGACATCAATGCTATTAAACCAGTCGAATCTGTGAACAATAAGGAGCATGAAGTTGTTGATGCTAGAAGTCCATCCCGACCGAAAAGATCACTTGAAAAAGAGAATAATGGACATTAA 3831 0.4119 MEHSDSMQCVRVAVNIRPLVTSELLIGCTDCISVVPGEPQVQIGSHSFTYDYVYGSMGSPLSAIYDDCVFPLVDALFHGYNATVLAYGQTGSGKTYTMGTNYTGEGSNDGIIPRVMETIFKKIQTMKESTEFLIRVSFIEIFKEEVFDLLDPNSTKGEVLCTAKVTMPARVPIQIRETANGGITLAGVTEPEVKTKEEMASFLSRGSLARATGSTNMNSQSSRSHAIFTITMEQKNGDDVLCAKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLALGNVISALGDERKRKEGGHVPYRDSKLTRLLQDSLGGNSKTMMIACVSPADTNAEETLNTLKYANRARNIQNKAVINRDPVGAQVQKMRSQIEQLQSELLFYRGDAGVPFEELQILKHKISLLEASNAELQRELRENRLTCDNLARRASDAQVEKDQLVLKIESVRNGKSWDEVDSNTNQDYDLVKSYVSKIQDLEGELQRLKKSNVKSSHFVDWADSDDGGFRSKNAVFASGNEYSSDCDTRSVDITDDLVDHAKESEHSSLQEKLDRELKELDKKLEQKEAEMKRFNNSDTSVLKNHYEKKLHELEQEKKFLQKEIEELRCNLSNIASTSDAGAQKLKEDYLQKLNALEAQVSELKKKQDSQVQLLRQKQKSDEAAKRLQDEIHRIKCQKVQLQHKIKQESEQFRLWKAAREKEVLQLKKEGRRTEYEMHKMLALNQRQKMVLQRKTEEASLATKRLKELLESKKHSSRETAGGNGPGIQALMQAIEHELEVTVRVHEVRLEYERQMAERAKIAEEIARLKEEEMMKQNNTSDSLISISPGARNSRIFALENMLEASSPTVVSMGSQLSAAEERERVFSGKGRWNQVRSLSDAKNVMNYLFNIACSSRCLLRDREVTCKEKDMEIRDLKENVVRLRCSLQQSEMQNAELIHQLKLQSFMGGHKYDLRKLENRRSIMLFEDMDISDAESDGYDVDATDDEWVESGKLQVRKRKSKSGRLSMEDNQTNSSSDDVKDNSKGLDCASEKTASDVCCSCSKSSSCKTTKCKCRALGGSCGSSCGCLATKCTNRASVSNESQEPTQYGVEGTGNDSRIEDTDKDHILATQGAELLQGALIARPAETNSNRGPRKPLSDIGNTMAKSNAQKGNLRKKWRKSSIVLVSDPPHSLQTSNSEVPKKENDNISETNVSASRPQNMHSYRPENSSIPSKTENNVIGTDIPLRIPRAMQRQVSSKVSVPLGDINAIKPVESVNNKEHEVVDARSPSRPKRSLEKENNGH 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1184 1276 Coils Coil 463 483 - -
Lal18g1184 1276 Coils Coil 363 383 - -
Lal18g1184 1276 CDD KISc_KIF4 9 349 - -
Lal18g1184 1276 MobiDBLite consensus disorder prediction 1250 1276 - -
Lal18g1184 1276 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal18g1184 1276 PRINTS Kinesin heavy chain signature 215 232 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal18g1184 1276 PRINTS Kinesin heavy chain signature 244 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal18g1184 1276 PRINTS Kinesin heavy chain signature 298 319 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal18g1184 1276 Pfam Kinesin motor domain 42 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal18g1184 1276 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 8 1248 - -
Lal18g1184 1276 Coils Coil 618 683 - -
Lal18g1184 1276 MobiDBLite consensus disorder prediction 1115 1211 - -
Lal18g1184 1276 SMART kinesin_4 7 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal18g1184 1276 Coils Coil 783 810 - -
Lal18g1184 1276 ProSitePatterns Kinesin motor domain signature. 243 254 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal18g1184 1276 SMART CXC_2 1027 1071 IPR033467 -
Lal18g1184 1276 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 8 1248 - -
Lal18g1184 1276 Coils Coil 391 425 - -
Lal18g1184 1276 Coils Coil 723 743 - -
Lal18g1184 1276 MobiDBLite consensus disorder prediction 986 1018 - -
Lal18g1184 1276 Coils Coil 538 609 - -
Lal18g1184 1276 Gene3D Kinesin motor domain 5 381 IPR036961 -
Lal18g1184 1276 ProSiteProfiles Kinesin motor domain profile. 9 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal18g1184 1276 Coils Coil 905 925 - -
Lal18g1184 1276 MobiDBLite consensus disorder prediction 1124 1143 - -
Lal18g1184 1276 MobiDBLite consensus disorder prediction 1160 1211 - -
Lal18g1184 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 382 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1184 Lal-Chr18 14721110 14729916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1184 10 398 Miscellaneous Gene Families AT4G39050 37.965 5.39e-59 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1184 - - gmx:100817984 1878.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1184 18 14721110 14729916 Lal18g1184 18 14721110 14729916 ECH
Lal18g1184 18 14721110 14729916 Lal22g0407 22 2652628 2661371 LSH