Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1181 ATGGTGTTTCCAATTATTGGATACAGAATGTGTTCAGTTCTTCGATCAAAGGTACAGTCTTTGGGGTCATACATCCATAGGGACCCTTGGTGGTGCATACCCTTTGTTGTTTCCTCTAGGACAAGGCCTTTGACAAAAGTTATGGGTTGGACCAAAACCTATTGTGGCCGTGCAGCTATATCTTCATTCAAGGAGCAACAACCAGAGGATTCAAGTAATTGTCACAGACTCAGTCCAGAAAACAAAGGCCTTGGTGTAGAGAAAATGGCTGAAACTGATGCCAATCAGGACTTGTTTGATTTGATGAAAAAGAGGTTTTTGAGTTTCAAGAAACACACATATATAAAAGAGTTGGAGCATTTTCAAGCTCTTGCTGAAGCTCAATCCCCAAAGTTTATGGTAATTGCTTGTGCAGACTCTAGGGTATGCCCTTCTAACATATTAGGATTCCAACCCGGTGACGCCTTTATGATACGAAACATTGCAAATCTTGTACCTGTGATGAAGAATGGACCATCAGAGTGTAATGCTGCTCTTGAGTTTGCAGTAACTACTCTTAAGGTTGAAAATATATTAGTCATTGGTCATAGTAGCTGTGCTGGAATAGAAACTCTGATGAATATGCAAGATGTACAACAAACAAGAAACTTCATACACAAGTGGGTTTCCAATGGGGAAGTTGCTAAATTGAGGACAAAAGCTGCCACATCTCATCTTAGCTTTGATCACCAATGCAGATTCTGTGAGAAGGAATCTATTAACCAATCACTAGTGAACATGCTCAGTTATCCTTGGATAGAAGATAGAGTGAAAAGAGAGTTGCTTTGTCTTCATGGAGGATACTATAATTTTTCGAATTGCTCATTTGAGAAATGGACCCTTGATTTTAAAGAAAGCAATGTTACAGAAGAAGGAAAAAGTTATGCAGTTAAAGAACAAGAATTCTGGGGCTGA 954 0.392 MVFPIIGYRMCSVLRSKVQSLGSYIHRDPWWCIPFVVSSRTRPLTKVMGWTKTYCGRAAISSFKEQQPEDSSNCHRLSPENKGLGVEKMAETDANQDLFDLMKKRFLSFKKHTYIKELEHFQALAEAQSPKFMVIACADSRVCPSNILGFQPGDAFMIRNIANLVPVMKNGPSECNAALEFAVTTLKVENILVIGHSSCAGIETLMNMQDVQQTRNFIHKWVSNGEVAKLRTKAATSHLSFDHQCRFCEKESINQSLVNMLSYPWIEDRVKRELLCLHGGYYNFSNCSFEKWTLDFKESNVTEEGKSYAVKEQEFWG 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1181 317 Gene3D Carbonic anhydrase 86 303 IPR036874 GO:0004089|GO:0008270
Lal18g1181 317 SMART Pro_CA_2 125 293 IPR001765 GO:0004089|GO:0008270
Lal18g1181 317 CDD beta_CA_cladeB 105 292 IPR045066 GO:0004089|GO:0008270
Lal18g1181 317 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 137 144 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lal18g1181 317 PANTHER CARBONIC ANHYDRASE 11 316 IPR001765 GO:0004089|GO:0008270
Lal18g1181 317 PANTHER CARBONIC ANHYDRASE 11 316 - -
Lal18g1181 317 SUPERFAMILY beta-carbonic anhydrase, cab 96 299 IPR036874 GO:0004089|GO:0008270
Lal18g1181 317 Pfam Carbonic anhydrase 133 286 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1181 Lal-Chr18 14700935 14705007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1181 K01673 - gmx:100812124 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1181 18 14700935 14705007 Lal18g1181 18 14700935 14705007 ECH
Lal18g1181 18 14700935 14705007 Lal6g0443 6 2795962 2796901 LSH