Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1175 ATGAGTTACAAAAGTGCTGAATTGCCTCAGGGAAATGGAAATGGTGGTGCTTCTCTTCCTTCTACTGATTCTGACCCTCAGCCTAGGCCACCAGAATATCTGCATTCTCATAGTGGCAATGGAAATGATAATATGGTTATTAAGAGCGGGTCTCTTTTCATATCTTCCAAAGGAATTGGATGGACATCCTGGAAGAAAAGGTGGTTTATTTTGACAAGAAGTTCACTTGTTTTCTTTAGAAGTGATCCAAATGCTCTGTCTCAGAAGGGTAGTGAAGTGAGTTTGACACTTGGTGGCATTGACCTCAACGATTCAGGCAGTGTTGTTGTCAAAGCAGATAAGAAACTCTTGACTGTACAATTTCCTGACATTCGTGATGGACGAGCATTCACACTTAAGGCTGAAACTACTGAGGATTTATATGAGTGGAAGAATGCACTTGAGGATGCTTTGGCACAAGCACCAAGTGCTGGTAATGTGAAGGGAGAAAATGAAGACTTGAAGAATGATCAGTTTGATTCACTTGACATTTGTTTGGATCAGTTGAAGGATGTGAAGGAAAGACGAGACCCGATGAAATCTATGGTCATTGGCAGGCCAATTTTACTTGCTTTGGAGGATACTGATGGAAGTCCAACTTTTCTGGAGAAAGCCTTGAGGTTCATAGAAGTGCATGGAGCCAAAGTAGAAGGGATCTTGCGACAAGCAGCTGATGTTGAACATGTTAAACATCGAGTGCGCGAATACGAGGAAGGAAACACTGAATTCTCGGAGGAGGAGGATGCACATGTTATTGCTGATTGTGTTAAGTATGTAATCCGGGAATTGCCATCTTCTCCTGTCCCTGCATCTTGTTGCAAGGCACTGTTAGAAGCTTGTCGAACTGGACGTGCCAATCGAGTTTCTGCCATGCGTATAGCAATTTGGGATACTTTTCCTGAACCAAACCGCTATCTATTGCAAAGAATACTGTTGATGATGCAAGCTGTAGCTTCCCACAAAGCTGAGAATAAAATGAGCTCATCAGCAGTGGCAGCTTGCATGGCACCATTACTTCTTCGCCCTCTTCTCGCCGGTGACTGTGAGATTGAAAATGATTTCGATGTTGGTGGTGATGATTCTGCTCAACTTCTACAAGCAGCTGCTGCAGCTAACCATGCTCAAGCAATTGTTATCACATTGTTGGATGAATATGGCAGCATATTTGGAGAAGGTTCTGAATATCCTGGCCCTGAAATGTTCACTGACTCAGAAGAGAGTGGATCTGAGTGTGAGGAGGTTACTGATGATGATTTATCCTACGATGACGATGATTATTATGACGATGAAGAAGATGAATCAATACATGAGTCTGAAGTAGATATAGATCATGATGATGATGATATTGTTAGTGAAACAGACAGTGAAAATGGTGACTCTATAGCCAATGGCAAATATGATGATAAGGACCATTGTCTTTCTAGCTCAAGTTCAAAATCCCCAAAGGTGTGTGAATATGATGAAGTTGATCAGGTATTGTCACCAATAAAGAATGCTTATGCAGACAAGTCCATTAAGCCTGTTGATATAGTTGGAGACTTTTCCACTTACCAAAACACAATGAATAACTCAAGTTGTCCTAGCCCTTCTTCACGTATGGAAAAATGTATAACAGTGTCCAAAGGGCCAGCACGTCGGCGCTGCACTATATTCGGGCGAACTTCTGCAAGGAAGAACCTTTCCATGGATTACATTAGTTACCCTGATGAAGATGAAGCTGAAATTGAGAGGCTTGAAGCTGTTAAGGCAGAATTGCAATGCCAAATTAGAGAGGAGGTGAAGGTAAATACAAAACTGCAATCTGATGTAGAAAAACGAAAGAAAGCCTTGCAAGAGCGTCGCCTTACACTTGCAAAAGATGTGGCTAGACTACAGGAACAGTTGCAAAAGGAGAAGAGTTCTAGAGCAACTATTGAAGCAGGACTCAGATTTCCTCAAAAACCTTTGTCTGATTTAACTATTATCGATGAAAAGACCAAGGCAGATCTTGATGAACTAGTGTTGATAGAAGTAGATGTTACCAACTTAGAGCAGAAGATTTATGAGCTTGGTGTGCGGCTTAATGTACATCTCGAACGGTATGGCTCTATGTTGGATTGCTTCAATCAACCCCAACAGATATCGAACCATGAAGGAAATTTGAAGAGTAAGCCAGATAGTGAAGTTGCAGCCACTTTGCAGTGTCAAAGTTCAATAAGTAAGAAGGACACTCATTTTACTGAAGCTGAAAATTTGAGTGAGAAAAAGCCAGAGTCAATGCCTTTACCAAACAAAGATTCACCTACATCCAAGAAATCGGGTACTTGGGGTGAGGGAGCAAGTTCCACTACTTGTGCACTGACAAAGTTGTCATCCAAACTAAACTTTTTGAAGGATCACCGTTGTCATTCAAATGAAGGCCAAGCGTCACCGAAGCGAGAAAACGTATCTGAACTTCTCCTACCACTTCCGTCCCCGAAGAAGTCTAGAGGATTTGAGTTTCACCTACCACTTCGATCTCCTAGTAAGTCTAGAGGATATGAATTTTTCCTACCGCTTCTGTCCCCGAGATTCAACAAGTCTAGAGGAGGTGAAATTCAGTCTCCAAAAGGTCCAAGCAAAGAAGTTCAATCACTTAATCATACCGAGAATTTGAGAAAATCAGATAGTCAGCCAGACCATATCTCAGATAGACAGAATCAACATCTACCATTATACTTGAGAAGAGGAAAATCAGAAGGCCATCATCACACATAA 2775 0.4162 MSYKSAELPQGNGNGGASLPSTDSDPQPRPPEYLHSHSGNGNDNMVIKSGSLFISSKGIGWTSWKKRWFILTRSSLVFFRSDPNALSQKGSEVSLTLGGIDLNDSGSVVVKADKKLLTVQFPDIRDGRAFTLKAETTEDLYEWKNALEDALAQAPSAGNVKGENEDLKNDQFDSLDICLDQLKDVKERRDPMKSMVIGRPILLALEDTDGSPTFLEKALRFIEVHGAKVEGILRQAADVEHVKHRVREYEEGNTEFSEEEDAHVIADCVKYVIRELPSSPVPASCCKALLEACRTGRANRVSAMRIAIWDTFPEPNRYLLQRILLMMQAVASHKAENKMSSSAVAACMAPLLLRPLLAGDCEIENDFDVGGDDSAQLLQAAAAANHAQAIVITLLDEYGSIFGEGSEYPGPEMFTDSEESGSECEEVTDDDLSYDDDDYYDDEEDESIHESEVDIDHDDDDIVSETDSENGDSIANGKYDDKDHCLSSSSSKSPKVCEYDEVDQVLSPIKNAYADKSIKPVDIVGDFSTYQNTMNNSSCPSPSSRMEKCITVSKGPARRRCTIFGRTSARKNLSMDYISYPDEDEAEIERLEAVKAELQCQIREEVKVNTKLQSDVEKRKKALQERRLTLAKDVARLQEQLQKEKSSRATIEAGLRFPQKPLSDLTIIDEKTKADLDELVLIEVDVTNLEQKIYELGVRLNVHLERYGSMLDCFNQPQQISNHEGNLKSKPDSEVAATLQCQSSISKKDTHFTEAENLSEKKPESMPLPNKDSPTSKKSGTWGEGASSTTCALTKLSSKLNFLKDHRCHSNEGQASPKRENVSELLLPLPSPKKSRGFEFHLPLRSPSKSRGYEFFLPLLSPRFNKSRGGEIQSPKGPSKEVQSLNHTENLRKSDSQPDHISDRQNQHLPLYLRRGKSEGHHHT 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1175 924 Coils Coil 620 640 - -
Lal18g1175 924 MobiDBLite consensus disorder prediction 864 924 - -
Lal18g1175 924 Coils Coil 588 608 - -
Lal18g1175 924 Gene3D Rho GTPase activation protein 181 403 IPR008936 GO:0007165
Lal18g1175 924 SMART RhoGAP_3 209 399 IPR000198 GO:0007165
Lal18g1175 924 MobiDBLite consensus disorder prediction 474 488 - -
Lal18g1175 924 SUPERFAMILY GTPase activation domain, GAP 209 404 IPR008936 GO:0007165
Lal18g1175 924 Pfam RhoGAP domain 212 355 IPR000198 GO:0007165
Lal18g1175 924 MobiDBLite consensus disorder prediction 1 23 - -
Lal18g1175 924 ProSiteProfiles PH domain profile. 45 152 IPR001849 -
Lal18g1175 924 MobiDBLite consensus disorder prediction 769 787 - -
Lal18g1175 924 MobiDBLite consensus disorder prediction 1 41 - -
Lal18g1175 924 MobiDBLite consensus disorder prediction 418 467 - -
Lal18g1175 924 CDD RhoGAP 212 348 - -
Lal18g1175 924 Gene3D - 35 153 IPR011993 -
Lal18g1175 924 SMART PH_update 46 154 IPR001849 -
Lal18g1175 924 CDD PH 48 147 - -
Lal18g1175 924 MobiDBLite consensus disorder prediction 750 787 - -
Lal18g1175 924 MobiDBLite consensus disorder prediction 750 767 - -
Lal18g1175 924 MobiDBLite consensus disorder prediction 406 494 - -
Lal18g1175 924 Pfam Leucine-zipper of ternary complex factor MIP1 623 700 IPR025757 -
Lal18g1175 924 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 14 812 - -
Lal18g1175 924 SUPERFAMILY PH domain-like 18 152 - -
Lal18g1175 924 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 14 812 - -
Lal18g1175 924 MobiDBLite consensus disorder prediction 886 902 - -
Lal18g1175 924 Pfam PH domain 46 151 IPR001849 -
Lal18g1175 924 ProSiteProfiles Rho GTPase-activating proteins domain profile. 203 402 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1175 Lal-Chr18 14649791 14659301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1175 - - cam:101498807 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1175 18 14649791 14659301 Lal18g1175 18 14649791 14659301 ECH