Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1165 ATGGATCTTCCTCCACAAATCGATGATTACATCAGAGAATCCATTGATCATTGCTTAGGTCTTCCCGTTTCTTCACAAACCCTACAGTTGAAGCTTCGTGCATTCCAAGAATTGCATCGGCAACTCCACCATCAAAACCAGTGTCTACTTGCAAAATTGAAGGAGAAAGATGAACTCATTGAGCGGACTAGGTCTGAAGCGACGATGAATGCGCAAGCCGTGAAGAGGTTCGTGGAGGAGAATGAGAAATTGGTGTCGGAGTGTGAGAATTTGATGAAGCAGTGTCAGAAATGGGAGAAGGAATGTGCACTGTATGATCATGATAGGGAAGCGTTGATGGAATTTGGGAACGAAGCTGATGAACGGGCGCAGGAGGCTCAGATGCGTGTCCAAGATTTGGAACAAAAATTGATGATGTTGGAGCTTGAGGTTTCAGAAATGAAGAAATCCAAGCATCAAAATGAATTGATTGATTCTACTTCTGCAAGCACACTTGGGGAAGAGAATTTGCTTGTCTCTCTTCTGGAAACTGTCACCAGTAAGGATTATTCTTCTACACATTCGTTCTTGGATGCACATAGTGAAAATGAGTCTTGTAAGAAGCTGCTTACAATGTGGAACTCAGTTTTGTCACTTGTTGCTGAAGTCAAGTCACTAGAAAATGATAAGGATCATTTAAGGATTAACCTTCACAGAGCTGAAGAGGAGGTCAAGTTACTTTTTGATGAAAATGGCATATTGGATGAGGAGAACAAAAGGTTAAAAAGGCAATGCAAGGAAAGGAACCTTCTCGGTTCTGGTGGCAAACTTACCAGCAGTACATCTGCCAAGTCAAATAAGAGAAAGTCTAGTCCCAGGACAAGTAGCCCAATGGAGAGGAAAATTGATTTCGATGATATAGATTCAGCAAGACAACCATTGTCACCCTTGCGAAATAATTCCCCGGGCTGTCGAATGTATATAAAACAATGA 972 0.4187 MDLPPQIDDYIRESIDHCLGLPVSSQTLQLKLRAFQELHRQLHHQNQCLLAKLKEKDELIERTRSEATMNAQAVKRFVEENEKLVSECENLMKQCQKWEKECALYDHDREALMEFGNEADERAQEAQMRVQDLEQKLMMLELEVSEMKKSKHQNELIDSTSASTLGEENLLVSLLETVTSKDYSSTHSFLDAHSENESCKKLLTMWNSVLSLVAEVKSLENDKDHLRINLHRAEEEVKLLFDENGILDEENKRLKRQCKERNLLGSGGKLTSSTSAKSNKRKSSPRTSSPMERKIDFDDIDSARQPLSPLRNNSPGCRMYIKQ 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1165 323 Coils Coil 116 150 - -
Lal18g1165 323 PANTHER PLANT PROTEIN MATCH IS: (TAIR:PLANT.1) PROTEIN, PUTATIVE-RELATED 1 320 - -
Lal18g1165 323 Coils Coil 74 101 - -
Lal18g1165 323 MobiDBLite consensus disorder prediction 266 285 - -
Lal18g1165 323 Coils Coil 209 250 - -
Lal18g1165 323 Coils Coil 46 66 - -
Lal18g1165 323 MobiDBLite consensus disorder prediction 286 301 - -
Lal18g1165 323 PANTHER EARLY ENDOSOME ANTIGEN 1 320 - -
Lal18g1165 323 MobiDBLite consensus disorder prediction 264 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1165 Lal-Chr18 14537711 14540551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1165 - - gmx:100796784 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1165 18 14537711 14540551 Lal18g1165 18 14537711 14540551 ECH
Lal18g1165 18 14537711 14540551 Lal4g0352 4 2397591 2400742 PCT
Lal4g0352 4 2397591 2400742 Lal18g1165 18 14537711 14540551 PCT