Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1154 ATGGGTTCTTTTGACACTATGAAACAGCCTCATGCTTTGTGCATCCCATACCCAGCACAAGGCCATATAAATCCAATGCTCAAACTAGCAAAACTCCTCCATTTGAAAGGTTTCTATATCACCTTTGTTAACTCAGAGTATAACCATAAACGCCTTCTCAAATCTAGAGGCCCTGATTCTCTGAATGGTTTCTCATCATTTCGTTTTGAAACCATTCCTGATGGTCTTCCTGAGTCTGATTGTGATGGCACACAACATATACCTTCTCTGTGTGACTCTACAAGAAAAACTTGCTTACCTCACTTTAAGAACCTCATTTCCAAACTTAATGATGCCTCAGATGTTCCTTCTGTTAGTTGCATTGTCTCTGATGGTATCATGAGTTTCACTGTTGATGCTGCTCAGGAATTGGCCATACCAGTGGTTCTGCTTTGGACAACTAGTGCATGTGGATTCATGTGTTACACTCAGTATCATCAACTTATTGACAAGGGCTTGACACCCCTTAAGGATTCAAGTTATTTCACAAACGGATATTTGGAGACTACTATTGATTGGGTGCCAGGCATCAAGGAAATAAGACTGAGGGATATCCCCACCTTCATGCGAACCACAAACCCAGATGAACTTATGCTTGATTTCGTACTAGGGGAGTGTGAGAGAGCTCAGAGAGCTTCTGCAATCATATTGAACACGTTTGATGCATTAGAACATGACATTTTGGACGCTTTCGCTTCATCCATTTCCCCTCCTGTTTATTCCATTGGTCCCTTGAATTTACTCTTAAACGATGTAACTGATAATGATTTGAAAACAATGGGATCCAACCTTTGGAAGGAGGACCCTAAGTGTTTGGAATGGCTCGACACTAAAGAACCCAACACTGTTGTTTATGTGAACTTTGGGAGCATCACCGTTATGACAAGTGACCAGTTGATTGAGTTTGCATGGGGCTTAGCTAATAGCAACAAAAGCTTTTTGTGGATCATAAGACCAGATCTTGTGACAGGTGAAAATGCGGTTCTACCTTTAGAGTTTGTGACAGAGACAAAAAATAGAGGGTTATTGTCAAGTTGGTGTTCCCAAGAGCAAGTGTTGTCCCACCCTGCAATCCTAGGGTTCTTGACTCATTGTGGTTGGAATTCAACGTTGGAAAGTGTGTGTGCTGGTGTTCCAATGATATGTTGGCCATTCTTTGCTGAGCAACAAACCAATTGTAGGTTTAGCTGCAATGAATGGGGAGTTGGGATTGAAATAGAAGAAGTTAAGAGGGATCAAGTTGCAAGTGTAGTGAGGGAATTGATGGATGAGAAAAAGGGTAAAGAAATGAAAGAAAAGGCTTTGGAATGGAAGAAGTTAGCAAAAGATGCTGCTTCTGGCCCTTATGGATCTTCCTTTCTAAATCTAGACAACATGGTTCATGAAGTTCTTCTTTGCAAAACTGATAAAAATTAG 1455 0.4096 MGSFDTMKQPHALCIPYPAQGHINPMLKLAKLLHLKGFYITFVNSEYNHKRLLKSRGPDSLNGFSSFRFETIPDGLPESDCDGTQHIPSLCDSTRKTCLPHFKNLISKLNDASDVPSVSCIVSDGIMSFTVDAAQELAIPVVLLWTTSACGFMCYTQYHQLIDKGLTPLKDSSYFTNGYLETTIDWVPGIKEIRLRDIPTFMRTTNPDELMLDFVLGECERAQRASAIILNTFDALEHDILDAFASSISPPVYSIGPLNLLLNDVTDNDLKTMGSNLWKEDPKCLEWLDTKEPNTVVYVNFGSITVMTSDQLIEFAWGLANSNKSFLWIIRPDLVTGENAVLPLEFVTETKNRGLLSSWCSQEQVLSHPAILGFLTHCGWNSTLESVCAGVPMICWPFFAEQQTNCRFSCNEWGVGIEIEEVKRDQVASVVRELMDEKKGKEMKEKALEWKKLAKDAASGPYGSSFLNLDNMVHEVLLCKTDKN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1154 484 PANTHER GLYCOSYLTRANSFERASE 55 477 - -
Lal18g1154 484 PANTHER GLYCOSYLTRANSFERASE 6 56 - -
Lal18g1154 484 Gene3D Glycogen Phosphorylase B; 11 459 - -
Lal18g1154 484 CDD GT1_Gtf-like 10 436 IPR002213 GO:0008194
Lal18g1154 484 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 56 - -
Lal18g1154 484 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 55 477 - -
Lal18g1154 484 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 473 - -
Lal18g1154 484 ProSitePatterns UDP-glycosyltransferases signature. 359 402 IPR035595 -
Lal18g1154 484 Gene3D Glycogen Phosphorylase B; 279 456 - -
Lal18g1154 484 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 65 456 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1154 Lal-Chr18 14437787 14440269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1154 8 478 Glycosyltransferase AT1G22340 61.474 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1154 - - gmx:100784251 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1154 18 14437787 14440269 Lal18g1154 18 14437787 14440269 ECH