Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1146 ATGAGCTACTTCAACCTCAAAACATGGCTTCTTAACTTGATTTTCTTATCTTCTCTTCTTTCTTTGTCCCATGGGAAACCAAATAAGAAGTTTCGAGTTAGAGCTGTTAACCTCGGTGGTTGGTTAGTTACTGAAGGATGGATCAAACCTTCTCTTTTCGATGGCATTCAAAATAAGGACTTCTTGGATGGAACTGGTGTTCAGTTTAAGTCAGTGACAACAGGGAAATATCTTTGTGCTGAGTTAGGAGGAGGAACAAGCCTAGTTGCAAACCGCACTGATGCTTCGGGTTGGGAAACATTTAGATTGTGGAGGTTAAACGAGAACAGTTTCAGATTCAGGGTGTTCAATAACCAGTTTGTAGGGCTGGATGGGATTAACGTTGTTGCTATTTCCAGTGTTTCCACTGATTCCGAGAAATTTCATTTTGTCAAGGAAGGTGGCAATTCGAGCCGTGTTCGAATCAAAGCATCGAACGGATACTTCATCCAGGCTAAGACAGAAGATCAGGTTACAGCTGATGTTACAAAGGTTAACGGATGGGGAGAGGATGACCCAACCGTTTTTGTATTGACCATTGCTTCAAGGTTGCAAGGTGAATTCCAAGTCACTAATGGTTTTGGCCCTAGGAAAGCTCCCCAAGTTATGAAGAAACACTGGAGAACTTTTATTGTTAAGGAAGATTTCAAGTTCATAGCCAGCAATGGATTAAATGCTGTAAGAATACCCGTTGGATGGTGGATAGCAAGTGATCCAACTCCACCCTGGCCTTATGTTGAGGGTTCCTTAAACGCACTAGACAATGCTTTCTTGTGGGCCCAGGAATATGGATTGAAAATCATAATTGATCTTCATGCTGCACCTGGTTCTCAAAATGGCTATGAGCATAGCTCTTCAAGAGATGGTTCTCAAGATTGGGGAAAAGCATACAAAAACATCCAACAAACACTTCATGTTATAGACTTCCTAACTGCAAGGTATGCAAATAGCCCAAGCCTTTATGCAGTTGAACTCTTAAACGAGCCTCGTGCACCTGGTGCAACCATAGAGAGCTTAACCAAGTACTACAAGGCTGGTTATGAAACTGTGCGTAGGCACTCCCTCACAGCTTATGTGGTGTTGTCAACAAGGTTAGGTACCTCAAATTCCATGGAAATATTACCTATTGCCAATGGTCTTAACCAATCTGTGATTGATGTACACTACTACAACCTTTTTGAACCTCAGCTTAACAACATTACTGTCCAACAAAACATTGATTTCATCCTAACCAACCGTTCATCACAGTTGAATTCTGTTACAACCTCCAATGGTCCTCTTACTTTTGTTGGTGAATGGGTTGCTGAATGGCAAATTCAAGGTGCTCTCCAAAAGGACTACGAAGCATTTGCCAAGGCCCAATTAGATGTTTATCGAAGAGCAACATTTGGATGGGCTTACTGGACTTTCAAAAATGTCAACAACCATTGGAGTCTAGAGTGGATGATCAAAAATGGTTATATCCATCTTTAA 1512 0.4147 MSYFNLKTWLLNLIFLSSLLSLSHGKPNKKFRVRAVNLGGWLVTEGWIKPSLFDGIQNKDFLDGTGVQFKSVTTGKYLCAELGGGTSLVANRTDASGWETFRLWRLNENSFRFRVFNNQFVGLDGINVVAISSVSTDSEKFHFVKEGGNSSRVRIKASNGYFIQAKTEDQVTADVTKVNGWGEDDPTVFVLTIASRLQGEFQVTNGFGPRKAPQVMKKHWRTFIVKEDFKFIASNGLNAVRIPVGWWIASDPTPPWPYVEGSLNALDNAFLWAQEYGLKIIIDLHAAPGSQNGYEHSSSRDGSQDWGKAYKNIQQTLHVIDFLTARYANSPSLYAVELLNEPRAPGATIESLTKYYKAGYETVRRHSLTAYVVLSTRLGTSNSMEILPIANGLNQSVIDVHYYNLFEPQLNNITVQQNIDFILTNRSSQLNSVTTSNGPLTFVGEWVAEWQIQGALQKDYEAFAKAQLDVYRRATFGWAYWTFKNVNNHWSLEWMIKNGYIHL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1146 503 PANTHER PUTATIVE-RELATED 6 502 - -
Lal18g1146 503 Pfam Cellulase (glycosyl hydrolase family 5) 217 485 IPR001547 GO:0004553|GO:0071704
Lal18g1146 503 SUPERFAMILY (Trans)glycosidases 30 502 IPR017853 -
Lal18g1146 503 Gene3D - 44 183 - -
Lal18g1146 503 PANTHER FASCIN 6 502 IPR010431 GO:0007015|GO:0051015
Lal18g1146 503 Gene3D Glycosidases 186 503 - -
Lal18g1146 503 SUPERFAMILY Actin-crosslinking proteins 67 181 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1146 Lal-Chr18 14368914 14373326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1146 - - gmx:100790619 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1146 18 14368914 14373326 Lal18g1146 18 14368914 14373326 ECH