Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1145 ATGCTGCTAGGGAAAAGACCTCGAAATCCAATGAAAAGAACCACAAGCATGTCAGAAATAATAACCTTGGATCTGAACACTTCCATCGATGTTGAACCAAAACACAAACTAGGAGTTAGTGTTGGTGTGTTAGATCAGAACAATAGGGTCCAAAGAAGACACTCAACTAATTCTATAGAGACCCCAGAATTCTTACGTGCTTGTTCTCTCTGCAAACGTTGTTTGGTACCTGGTCGTGACATCTATATGTACAGAGGTGACAGTGCTTTCTGCAGCATGGAGTGTAGGCAACAGAGGATGAAGCAAGATGAGAGAAAAGAAAAGTATTTTGTAGCATCAAATAAGAAACAACAAGTTGTGACTCCAACTCCTTCATCAGGTTCTCAAGTAGTTACAAAAGGTGAAACTGTAGCTGCCTTGTAG 423 0.4066 MLLGKRPRNPMKRTTSMSEIITLDLNTSIDVEPKHKLGVSVGVLDQNNRVQRRHSTNSIETPEFLRACSLCKRCLVPGRDIYMYRGDSAFCSMECRQQRMKQDERKEKYFVASNKKQQVVTPTPSSGSQVVTKGETVAAL 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1145 140 Pfam zinc-finger of the FCS-type, C2-C2 57 106 IPR007650 -
Lal18g1145 140 PANTHER FCS-LIKE ZINC FINGER 5 1 139 - -
Lal18g1145 140 PANTHER FCS-LIKE ZINC FINGER 5 1 139 - -
Lal18g1145 140 MobiDBLite consensus disorder prediction 117 140 - -
Lal18g1145 140 MobiDBLite consensus disorder prediction 117 133 - -
Lal18g1145 140 ProSiteProfiles Zinc finger FLZ-type profile. 63 107 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1145 Lal-Chr18 14360734 14362197 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1145 - - gmx:100527853 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1145 18 14360734 14362197 Lal18g1145 18 14360734 14362197 ECH
Lal18g1145 18 14360734 14362197 Lal17g0429 17 2891450 2893199 PCT
Lal17g0429 17 2891450 2893199 Lal18g1145 18 14360734 14362197 PCT