Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1136 ATGTGGAAAGAGAATCTGCAAGACGGTGTAGGGCGTTATGTTTGGAAGAACGGGAACGAGTACGTTGGTGAATGGAAGAACGGCGTTATTAACGGGAAGGGAGAGTTGGTGTGGAGTAACGGAAACCGTTACGTTATGAGGAAGAGTGGTTCTGCTGTTGACGTTGGAAGAGGGAGTGTTAGTGAGAAGATTTTTCCGAGGAATTGTGATATTCTTGATAATGTGGATGCTTCGATGCATTACCAAGATGGAATGGCGTCCGATTGTGATGACGTTAAGCATTTTCGGCGAAAACCTTGTGGTGGTTTTTCTTCCGAGGTGAAGAAACCGGGGCAAACGGTATCCAAAGGGCATAAGAATTATGATTTGGTACTTAATCTTCAATTTGGTATAAGGTACACGGTTGGGAAGGAAGACTCGATATTGCGAGAACTGAAACAGAGTGATTTTGATCCCATGGAGAAGTTGTGGACAAGGTTTCCCCCTGAAGGGTCGAAGAATACGCCACCCCATCAAACTGCGGAATTCAAATGGAAGGATTACTGCCCTGTTGTTTTTAGACATTTGAGGAAGCTATTTCAGGTGGATCCTGGTGATTACATGTCGGCTATATGTGGGAATGATGCCCTCAGGGAGCTTTCCTCTCCTGGGAAAAGTGGAAGTATCTTTTACTTGACTCAAGATGACAAATTGATGATAAAGACTGTGAAGAAATCTGAAGTCAAGCTGAGAACAGATTACACTCCATTATCAAATGTTTATACCTGCTTTGTTTTCTACTCCGAGGCAGTAGTTGATGAAGTTTCTAGTAGGACAGGCAACTTGGGCTTTGGAAGAGGGAGGTTTATGGTTCTTATTCGGATGCTTCGAAGTTATTACCAACATATGTCTCAATTTGAGAATTCACTTTTGACAAAATTCTATGGGGCGCACTGTGTCAAACCCATTGGAGGCCAGAAGATTCGGTTCATTGTGATGGGCAATCTTTTCAGCTCCGAATATCCAATCCATAGACGATTTGACTTGAAGGGATCTTCACATGGTCATATGGCAGATAAACCTGAGGAGGAGATTGATGAAACTTCCACCCTCAAGGATCTTGATCTCAATTATGTGTTTCACGTACAAAGAAAGTGGTTTCAAGTGCTCATCAAACAAATTGAACTGGACTGCAAGTTCTTGGAAGCTGAGAAAATTATGGATTACAGTCTTTTGGTTGGGTTTCATTTTCGTGATGGTAATACTTGCGACAAAATGGGATTGTCACCATTTCTTTTACGCACTGGTAGTCGAGACTCTTATCAGTATGAAAAGTTCATGCGTGGTCACCACTTTCTTGAAGCTGAGCTGCAAGATAGGGACCATGTTAAGTCTGGAAGGAAATCGTTAATCAGGCTAGGAGCCAATATGCCCGCAAGAGCAGAGCGAATAGCACGGAGGAGTGATTTTGATCAATACACCGGTGCTGGAATCAGGCATTTGAACCCCTATAGCAGGGGGGAGACTTATGATATCATTCTATATTTTGGTATTATTGACATTTTGCAAGATTATGGTATTAGCAAGAAGCTTGAGCATGCTTACAAGTCCTTGCAGGTTGACTCTACTTCAATCTCAGCTGTTGATCCAAAGCTCTACTCGAAGAGGTTTCATGAATTTGTAGGGAGGATATTCGTCGAAGACTGGTGGCATTGGGTACAAAATAAGGCTGAAATATGTATCAATGAAGGTTAA 1734 0.4239 MWKENLQDGVGRYVWKNGNEYVGEWKNGVINGKGELVWSNGNRYVMRKSGSAVDVGRGSVSEKIFPRNCDILDNVDASMHYQDGMASDCDDVKHFRRKPCGGFSSEVKKPGQTVSKGHKNYDLVLNLQFGIRYTVGKEDSILRELKQSDFDPMEKLWTRFPPEGSKNTPPHQTAEFKWKDYCPVVFRHLRKLFQVDPGDYMSAICGNDALRELSSPGKSGSIFYLTQDDKLMIKTVKKSEVKLRTDYTPLSNVYTCFVFYSEAVVDEVSSRTGNLGFGRGRFMVLIRMLRSYYQHMSQFENSLLTKFYGAHCVKPIGGQKIRFIVMGNLFSSEYPIHRRFDLKGSSHGHMADKPEEEIDETSTLKDLDLNYVFHVQRKWFQVLIKQIELDCKFLEAEKIMDYSLLVGFHFRDGNTCDKMGLSPFLLRTGSRDSYQYEKFMRGHHFLEAELQDRDHVKSGRKSLIRLGANMPARAERIARRSDFDQYTGAGIRHLNPYSRGETYDIILYFGIIDILQDYGISKKLEHAYKSLQVDSTSISAVDPKLYSKRFHEFVGRIFVEDWWHWVQNKAEICINEG 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1136 577 Gene3D - 329 558 - -
Lal18g1136 577 Pfam MORN repeat 2 19 IPR003409 -
Lal18g1136 577 Pfam MORN repeat 21 43 IPR003409 -
Lal18g1136 577 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 283 561 IPR023610 -
Lal18g1136 577 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1 44 IPR023610 -
Lal18g1136 577 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 48 246 IPR023610 -
Lal18g1136 577 Gene3D - 1 51 - -
Lal18g1136 577 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 113 558 IPR002498 GO:0016307|GO:0046488
Lal18g1136 577 SMART PIPK_2 146 559 IPR002498 GO:0016307|GO:0046488
Lal18g1136 577 CDD PIPKc_AtPIP5K_like 120 557 - -
Lal18g1136 577 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 2 1 44 - -
Lal18g1136 577 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 2 48 246 - -
Lal18g1136 577 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 2 283 561 - -
Lal18g1136 577 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 2 45 - -
Lal18g1136 577 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 106 328 IPR027484 -
Lal18g1136 577 SUPERFAMILY SAICAR synthase-like 116 247 - -
Lal18g1136 577 SUPERFAMILY SAICAR synthase-like 283 558 - -
Lal18g1136 577 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 205 556 IPR002498 GO:0016307|GO:0046488
Lal18g1136 577 SMART morn 19 40 IPR003409 -
Lal18g1136 577 SMART morn 1 17 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1136 Lal-Chr18 14302197 14306588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1136 2 561 Acyl Lipid Metabolism Gene Families AT1G77740 59.581 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1136 K00889 - gmx:100790632 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1136 18 14302197 14306588 Lal22g0466 22 3075451 3081012 LSH