Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1131 ATGGAAGCTTCGAAGAAGAAGAGTGAAACCAAACTCACCAGAACCCAATCCTCTCTCATTCGTTCTCGATCCTCCATTGATTTCATCATCTCTGCTCACCACGAAGATGAACTTGTAGATGAGAAGAACAACATGAAGAAGAATCAGAGTAAGTATAGGAATAAGAAAAACAAGCCGAGCTATAAAACCGGTTCGACCCGGTTCATCACCGCCCCGGTTCTTTACTTCTTCATCTTCTGCTCCTCTATTCTCTACTACTTCTTCTTCTACCTCGGAGCCTCCGAAGAAACACCCACTTCGGAAAACGTGTTACTTGTGCTTATTTTCGTAGCCGTGGTGCTTTACTTCGCGAACAAAAACAAGGGCATGATTCAAAAAACCATCTTGGTATTAAAGCACTCGAGGGACATGAACCTGAAAAGGCGCGGTTTTTACTCAAAGTGCGGTAATAACACAGAGCCGGTGAAGTGGTATATTGGAGATTCTGGTGAAAGTGAAAACAGCGAGGTGGAGGAGGAAGAGGAAGAAAAAGATGAATTATTAGTTGAAAAAGAAGGGGTGGAGTTTTACAGCAATGGTGATTTTTACGAGGGGGAGTTTCATAGAAAGAAGAGTAATGGGAGTGGGGTTTATCACTATTTTGTGAGTGGAAGATATGAGGGTGATTGGGTTGATGGGAAATATGATGGGTATGGAATTGAAATCTGGGCAAGGGGAAGTTGCTATAAGGGTGAATATAGACAAGGTTTGAGGCATGGTTATGGGGTTTACAAGTTCTATACTGGGGACTCTTATTCTGGGGAATGGTTTAATGGGCAAAGCCATGGTTTTGGTGTGCAGAATTGCTCTGATGCTAGTTCTTATGTTGGGGAGTTTAATTTTGGGGTCAAGCATGGCCTTGGATGTTACCATTTTAGATTTGTATCAGCCACCCAGATATATCTTGCTTCAGTAACAAGTCCCAATTCATCTGAGTTTGTGTTCTCTTGGATTCCTATTATAGACACCATATCTATAAATGGAGATAGATATGCGGGAGAGTATTTCGGAGACAAAATACATGGATTTGGGGTCTACGACTTTGCCAATGGACACCGTTATGAGGGAGCATGGCACGAAGGCCGTAGGCAAGGTTATGGTGTTTATATTTTCCGTAATGGTGAACGAAGATGTGGAGAATGGGATGCTGGCAACCTCAAGCACTCTCTACCGCGTCTAACTGATGCTATACTTAGAGCAATTCAGGCTGCTAGGAAAACAGCAGAGAATGCTAGAAACCTTCGCCGGAAGGATAATGAAGTGAACAAAGCCGTAATAGCCGCAAACAGAGCCGCCACTGCTGCTAGAATTGCTGCTGTGAAAGCTGTTCAGAACAGGATGGGTGGAAAATTTTGTGATACTCATGTCTAA 1410 0.4319 MEASKKKSETKLTRTQSSLIRSRSSIDFIISAHHEDELVDEKNNMKKNQSKYRNKKNKPSYKTGSTRFITAPVLYFFIFCSSILYYFFFYLGASEETPTSENVLLVLIFVAVVLYFANKNKGMIQKTILVLKHSRDMNLKRRGFYSKCGNNTEPVKWYIGDSGESENSEVEEEEEEKDELLVEKEGVEFYSNGDFYEGEFHRKKSNGSGVYHYFVSGRYEGDWVDGKYDGYGIEIWARGSCYKGEYRQGLRHGYGVYKFYTGDSYSGEWFNGQSHGFGVQNCSDASSYVGEFNFGVKHGLGCYHFRFVSATQIYLASVTSPNSSEFVFSWIPIIDTISINGDRYAGEYFGDKIHGFGVYDFANGHRYEGAWHEGRRQGYGVYIFRNGERRCGEWDAGNLKHSLPRLTDAILRAIQAARKTAENARNLRRKDNEVNKAVIAANRAATAARIAAVKAVQNRMGGKFCDTHV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1131 469 SMART morn 194 215 IPR003409 -
Lal18g1131 469 SMART morn 263 284 IPR003409 -
Lal18g1131 469 SMART morn 240 261 IPR003409 -
Lal18g1131 469 SMART morn 217 238 IPR003409 -
Lal18g1131 469 SMART morn 365 386 IPR003409 -
Lal18g1131 469 SMART morn 286 307 IPR003409 -
Lal18g1131 469 SMART morn 342 363 IPR003409 -
Lal18g1131 469 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 190 305 - -
Lal18g1131 469 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 340 398 - -
Lal18g1131 469 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 340 463 - -
Lal18g1131 469 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 16 306 - -
Lal18g1131 469 Pfam MORN repeat 265 283 IPR003409 -
Lal18g1131 469 Pfam MORN repeat 288 305 IPR003409 -
Lal18g1131 469 Pfam MORN repeat 196 213 IPR003409 -
Lal18g1131 469 Pfam MORN repeat 242 263 IPR003409 -
Lal18g1131 469 Pfam MORN repeat 367 389 IPR003409 -
Lal18g1131 469 Pfam MORN repeat 219 240 IPR003409 -
Lal18g1131 469 Pfam MORN repeat 344 366 IPR003409 -
Lal18g1131 469 Coils Coil 35 58 - -
Lal18g1131 469 MobiDBLite consensus disorder prediction 41 62 - -
Lal18g1131 469 Coils Coil 163 183 - -
Lal18g1131 469 Gene3D - 226 274 - -
Lal18g1131 469 Gene3D - 346 415 - -
Lal18g1131 469 Gene3D - 181 225 - -
Lal18g1131 469 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 16 306 - -
Lal18g1131 469 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 340 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1131 Lal-Chr18 14267498 14270109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1131 191 403 Acyl Lipid Metabolism Gene Families AT1G21980 30.516 9.58e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1131 - - lang:109357365 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1131 18 14267498 14270109 Lal18g1131 18 14267498 14270109 ECH