Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1125 ATGGAAGAAACCATAATTTGCCAGTGGAGCGTGTTTAGATCTCTTTTAGCAATTCTTCAATGGTGGACTTTCAATGTCACTGTTATTATCATGAATAAGTGGATCTTCCAGAATTTAGACTTCAAGTTTCCCCTATCAGTATCCTGTATCCATTTTATCTGCTCATCCATCGGAGCATACGTGGTAATTAAGATGCTGAAGCTTAAACCACTGATACATGTCGACCCTGAAGATCGCTGGAGAAGAATCTTTCCAATGTCATTTGTGTTCTGTATTAACATAGTGCTGGGCAATGTGAGCCTGCGATATATTCCAGTTTCTTTTATGCAGACCATAAAATCATTCACACCTGCAACAACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAGTATTTTGAATGGCGTATTTGGGCTTCTCTCGTACCCATTGTTGGAGGAATTCTTCTCGCTTCTGTTACAGAGCTTAGTTTTAACATGTTCGGATTTTGTGCTGCCTTATTTGGCTGTTTGGCTACATCTACGAAGACTATCCTTGCAGAGTCTCTGTTGCATGGATACAAATTTGACAGTGTAGTGATGCTGAAGCAACCTGAGCCTCCAACAATCCACTCTCTGGAATCGTTTCCTCTCACGTATGAAGTGCGTCTTGCGAAGAATAGTCGGAAAACGATTTCTGATGCACTCTCTGCTAATGTTGCAGTCACATCGATCTCCTCCTCTGGTTCGTCTTCAAACCAGTCCCATTCGTCTCAGCTGTTACCGTTGTCTTTGCAGCTTCCTTCTCGTCCTGACGGTCCTATGGTAGCTATGGCGGTTATGATAACTAAGGTGGTTATCATGGGGGGCACTGTGGTGTTGGTAAAATTCATAAACACAGTTTATTACATGGCACCTTTTGCAACCATGATCTTGGCGCTACCTGCTATGTTACTTGAGGGCAATGGGATTCTTGAGTGGCTAAGTATTCACCCATATCCTTGGTCAGCCCTGATAATCATTTTCACCTCTGGGGTTTTGGCGTTCTGCCTTAATTTCTCCATTTTTTATGTGATTCACTCCACCACTGCTGTAACGTTTAATGTTGCTGGAAACCTTAAGGTTGCAGTTGCTGTTCTTGTTTCTTGGCTAATATTTAAGAACCCGATTTCATATTTAAATGCTGTTGGATGTGCTGTGACTCTTGTTGGGTGTACATTCTATGGTTATGTCAGGCATATGATCTCCCAACAGCCACCAGTTCCAGGGACTCCTCGGACTCCTAGGACACCCAGAACACCTAGGACTCCTATGAGTAAGATGGAGTTGCTTCCACTTGTAAATGATAAATTAGATGATAAGATCTAA 1344 0.4249 MEETIICQWSVFRSLLAILQWWTFNVTVIIMNKWIFQNLDFKFPLSVSCIHFICSSIGAYVVIKMLKLKPLIHVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFEWRIWASLVPIVGGILLASVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSVVMLKQPEPPTIHSLESFPLTYEVRLAKNSRKTISDALSANVAVTSISSSGSSSNQSHSSQLLPLSLQLPSRPDGPMVAMAVMITKVVIMGGTVVLVKFINTVYYMAPFATMILALPAMLLEGNGILEWLSIHPYPWSALIIIFTSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFKNPISYLNAVGCAVTLVGCTFYGYVRHMISQQPPVPGTPRTPRTPRTPRTPMSKMELLPLVNDKLDDKI 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1125 447 Pfam Triose-phosphate Transporter family 15 191 IPR004853 -
Lal18g1125 447 Pfam Triose-phosphate Transporter family 294 400 IPR004853 -
Lal18g1125 447 PANTHER SOLUTE CARRIER FAMILY 35 4 193 - -
Lal18g1125 447 PANTHER SOLUTE CARRIER FAMILY 35 288 426 - -
Lal18g1125 447 PANTHER GDP-MANNOSE TRANSPORTER GONST5 288 426 - -
Lal18g1125 447 PANTHER GDP-MANNOSE TRANSPORTER GONST5 4 193 - -
Lal18g1125 447 SUPERFAMILY Multidrug resistance efflux transporter EmrE 71 152 - -
Lal18g1125 447 SUPERFAMILY Multidrug resistance efflux transporter EmrE 317 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1125 Lal-Chr18 14215170 14220285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1125 290 447 Organic Solute Cotransporters AT1G77610 80.503 3.02e-84 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1125 K15285 - vvi:100243662 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1125 18 14215170 14220285 Lal18g1125 18 14215170 14220285 ECH