Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1117 ATGGTTAAGAGGGGTGACAGAAATAATCATCAAGGTGAAACCTTTGATGTTTCCATGGATGTCTATCCATCACAAGATGCCAATGACTTGGATGATGATGGCCGCCCCAAAAGAACAGGAACTATATGGACAGCTAGTTCACACATAATAACTGCTGTGATTGGTTCTGGGGTGCTATCTTTGGCTTGGGCTATAGCTCAGCTTGGTTGGATTGCTGGTCCTATTGTCATGATTCTCTTTTCTATTGTGACTTATTACACTTCTACTCTTCTAGCTTATTGTTACCGTACTGGAGACCCTCTAAGTGGCAAGAGAAATTACACTTACATGGATGCTGTTGAATCAAACCTTGGTGGCATTAAGGTTAAGGTTTGTGGGTTTGTTCAATACATTAACCTTTTTGGAGTTGGCATTGGGTACACTGTAGCTGCTGCTATAAGTGCCATGGCAATCAAAAGGTCTAATTGTTTCCACAGTAGCCATGGAAAAGATCCTTGCCACATGAATAGCAACATTTACATGATTTCATTTGGTGCTGTGGAGATTATTCTCTCTCAAATTCCAGATTTTCATGAGTTATGGTGGCTCTCTATTGTAGCTGCTGTCATGTCATTCACATACTCATTTATTGGGCTTGGCCTTGGTATTGGTAAAGTTGTAGGAAACAAAAAAATTAAAGGAAGTATAACTGGTGTAGCTGTTGGTACCATCACACAGACACAAAAAATATGGAAGACCTTTCAAGCTCTTGGTAACATAGCCTTTGCCTACTCATACTCAATGATCCTTATCGAAATTCAGGACACAGTCAAAAGTGGTCCTCCATCAGAGGCAGAAACAATGAAGAAGGGTACTTTAATCAGTGTCCTAGTAACCACTTTTTTCTACATGCTATGTGGTTGTTTTGGCTATGCTTCTTTTGGAGACTCAAGCCCTGGTAACCTTCTTACTGGTTTTGGCTTCTATAATCCATATTGGCTCATTGACATAGCTAATGTTGCCATCATTGTCCACCTTGTTGGTGCATACCAAGTTTACTGCCAACCTCTTTTCTCATTCATAGAGATTAACACAGCAAAGAATTTCCCAAATAGTGATTTTATCAACAAAGATTTTGAAATACCAATCCCTGGTTGCAATGCATACAAACTCAACCTCTTCAGATTAATTTGGAGGTCAATTTTTGTGATCATAACAACTGTAATAGCAATGCTTCTTCCATTCTTCAATGACATAGTAGGACTTATTGGAGCTATTGGATTTTGGCCTCTTACTGTGTATTTCCCAGTGGAAATGTATATTTCTCAGAAGAAAATACAAAAGTTGAGCCTGAGATGGATATGCCTAGAGATGCTTAGTTTTGCTTGTCTTATGATTTCTCTAGCTGCTGCTGCAGGATCAATTGCTGGCATTATTGATGATGTCAAAGCTTATAAGCCATTCCAAACCAGTTACTGA 1458 0.3916 MVKRGDRNNHQGETFDVSMDVYPSQDANDLDDDGRPKRTGTIWTASSHIITAVIGSGVLSLAWAIAQLGWIAGPIVMILFSIVTYYTSTLLAYCYRTGDPLSGKRNYTYMDAVESNLGGIKVKVCGFVQYINLFGVGIGYTVAAAISAMAIKRSNCFHSSHGKDPCHMNSNIYMISFGAVEIILSQIPDFHELWWLSIVAAVMSFTYSFIGLGLGIGKVVGNKKIKGSITGVAVGTITQTQKIWKTFQALGNIAFAYSYSMILIEIQDTVKSGPPSEAETMKKGTLISVLVTTFFYMLCGCFGYASFGDSSPGNLLTGFGFYNPYWLIDIANVAIIVHLVGAYQVYCQPLFSFIEINTAKNFPNSDFINKDFEIPIPGCNAYKLNLFRLIWRSIFVIITTVIAMLLPFFNDIVGLIGAIGFWPLTVYFPVEMYISQKKIQKLSLRWICLEMLSFACLMISLAAAAGSIAGIIDDVKAYKPFQTSY 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1117 485 PANTHER AMINO ACID CARRIER 9 479 - -
Lal18g1117 485 Pfam Transmembrane amino acid transporter protein 38 472 IPR013057 -
Lal18g1117 485 PANTHER OS05G0424000 PROTEIN-RELATED 9 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1117 Lal-Chr18 14142563 14149711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1117 8 485 Organic Solute Cotransporters AT1G77380 71.967 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1117 K24917 - gmx:100796082 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1117 18 14142563 14149711 Lal18g1117 18 14142563 14149711 ECH