Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1116 ATGTTGTATCTAACTATGTGCCACGTGGCATCATTTGCCGTCGATATGAATTCGCCGGCGACGGTGACCGGAGTCTTGTTCAAACCTCCTCCGTCGTTGGGAAATTCTAGAGTCTTCGAGTTTCATAGGAATGGAAGAAAGCTCCGTAGACGTTTTCTCAAGTTTGTTATAAGCGCTGAACTCTCCAATTCATTTTCCTTCGATTTCGGTTTGGACTCTCTGCACTTGAATTCCTTCCAATCCCATGATCCATCACAGTTGTCTTGGATGGGTCCAGTTCCAGGTGATATAGCTGAAGTGGAGGCGTATTGTAGGATCTTCAGGAACTCTGAAAGGCTTCATTTCGCATTAATGGATGCGTTGTGTAACCCAGTGACCGGGGAATGTAGTGTCTCATATGAGGTTTCATCAGATGAGAAACCTCAACTAGAAGATAAGATAGTTTCCGTCCTTGGATGCATGGTATCACTTGTAAACAAAGGAAGGGAAGATGTTCTTTCTGGAAGATCCTCGATCATGAATCCCTATCGTGTTTCAGATGTTAGCTCAATGGACGATAACCTCCCCCCACTCGCTGTTTTTAGGAGTGAGATGAAAAGGTGTTCTGAGAGCTTGCATGTTGCCCTTGAAAACTATTTAATACCTGATGATGAGCGAAGCTTAAATGTATGGAGGAAACTTCAGAGACTGAAGAATGTCTGCTATGATTCTGGTTTTCCTCGTGGGGATGGTTATCCTTGTCATACACTATTTGCAAATTGGAGTCCTGTATATTTATCCACTTCTAAAGAGGATACAGAATCCAAAAACTCAGAGCCAGCTTTTTGGGCAGGTGGTCAAGTAACAGAAGAAGGTCTAAAGTGGTTATTGGATAAAGGATATAAAACTATAATAGATATCAGAGCAGAGAATGTAACAGATAACTTCTATCAAGCGGCTATTCATGATGCTATTTCGTCTGGAAGAATTGATTTGCTAAAAATACCAGTTGAAGTTAAGACTGCACCCACAATGGAACAGGTTGTGAGGTTTGCATCTTATGTTTCAGATTGCAGCAAAAGGCCTATCTATCTTCACAGCAAGGAAGGCGCTTTGAGAACATCTGCCATGGTCTCCCGATGGCGACAGTACATGACTCGCTCTACATCGCAAATAGTTTCTAATCCATCAGTCACTTCCTATGACGTGTTATCGCGTTATACAAATGGACATGTGAAGCTGCAGGCCTCTTCAATGACTGTAGAGAGATCCTCGCTTGAAAAAGATAACAATTCACCACAAGAGAGATTGGATGCAAGTCATAGTTCTATTGGAACATTTGACAGAAATACCTCTCAAAACAAGAAAAATGATAAAGCACAAGGTAATGGGGCCTTAACTGGAATTACTTCTGATAATAAGAAACCATCAGAAGCCACTGCTGCCAGAGGGGTAGGATCTATCCCAAGTTTCTTCACAAATATTAACCCTTTAAAAGCTCAAGTTCCTCCTTGCAATATCTTTTCCAAAACAGAGGTGTCCAAATTTTTGGGAAGCAGTAAGATCTCACCACCCTCTCATGCCGATTATCAGATGAAAAGGTTGGAATCCTTAGCACAGTTCCGAAACATGCATATTCGAATATTACAGGGGCATGTTGTTGTCAGCAGTGTTGATGATTCGGTACCTAAAACTTCGGGTCTGAAAAGTTTCAATGGGTCAGCTCATGTGGATCATCCTTCTGGAGAGTCCCAGATTACAGTTGGTGGCAATGGGAAGTTAGTGAGTCGGAATACATCTGGTTCTGTTAGGAGAGCAGTGAATGGATTTAGTGAAGGGGAAATACATCACCTGACTAATGCCAATGTTTCTACCTCTGCCATTGTGAACAGTGACTCTGATAATGTCACAGCTAACTCTCAAAGAGTTGAAGATGGTGTGGTTAAGGCTGAGTTAGACTTATATGACGAAGACTTGGGATCCATTGAAGGAAATATGTGTGCATCTTCGACGGGAGTTGTAAGGGTGCAGTCAAGAAAGAAAGCAGAGATGTTTCTAGTTCGAACGGATGGAATTTCTTGTTCCAGAGAAAAGGTGACCGAATCTTCTTTGGCTTTCAGTCACCCTACCACCCAGCAACAGATGCTTATGTGGAAATCTATGCCAAAGACAGTGTTATTGTTGAAAAAGCTGGGGGAAGAACTAATGGAAGAGGCAAAAGAGGTTGCTTCTTTTCTGTACCATCAAGAGAAAATGACTGTTCTTGTGGAGCCTGATGTGCATGATATATTTGCTAGAATTCCAGGGCTTGGATTTGTTCAGACCTTCTATAGTCAAGATATCAGTGATCTACATGAAAAAGTAGATTTTGTAACATGCTTGGGTGGAGATGGTGTTATACTGCATGCTTCAAATATATTTAGAGGTGCTGTTCCCCCTATTGTGTCATTTAACCTTGGATCCCTTGGCTTTCTGACTTCCCATAGTTTCGGAGACTACAAGCAGGACTTACGACAACTCATCCATGGAAATACTACACGAAATGGTGTATACATTACTCTTAGAATGCGTCTTCGATGTGGAATTTTTCGTAATGGTAAAGCAATGCCAGGAAAAGTATTTGATATCCTCAATGAGGTTGTTGTTGATCGGGGTTCTAATCCATACCTTTCAAAGATTGAATGTTATGAACATGGTCGACTTATAACCAAAGTACAAGGTGATGGAGTCATTGTGGCCACCCCTACAGGAAGTACTGCCTATTCTACATCTGCCGGAGGTTCCATGGTCCATCCAAACGTTCCCTGCATGCTGTTTACCCCGATCTGCCCACATTCGCTTTCATTTAGACCAGTTATACTTCCAGATTCTGCTGAACTTGAATTAAAGATTCCAGAAGATGCAAGAAGTAGTGCTTGGGTTTCATTTGATGGAAAGAGAAGACAGCAACTCTCAAAAGGAGATTCTGTCAGAATATATATGAGTCAGCATCCGCTTCCAACGGTTAACAAGTTTGACCAAACGGGTGATTGGTTCCATAGTTTGATTCGCTGCCTAAATTGGAATGAGAGGCTTGATCAAAAAGCTCTATAA 3072 0.418 MLYLTMCHVASFAVDMNSPATVTGVLFKPPPSLGNSRVFEFHRNGRKLRRRFLKFVISAELSNSFSFDFGLDSLHLNSFQSHDPSQLSWMGPVPGDIAEVEAYCRIFRNSERLHFALMDALCNPVTGECSVSYEVSSDEKPQLEDKIVSVLGCMVSLVNKGREDVLSGRSSIMNPYRVSDVSSMDDNLPPLAVFRSEMKRCSESLHVALENYLIPDDERSLNVWRKLQRLKNVCYDSGFPRGDGYPCHTLFANWSPVYLSTSKEDTESKNSEPAFWAGGQVTEEGLKWLLDKGYKTIIDIRAENVTDNFYQAAIHDAISSGRIDLLKIPVEVKTAPTMEQVVRFASYVSDCSKRPIYLHSKEGALRTSAMVSRWRQYMTRSTSQIVSNPSVTSYDVLSRYTNGHVKLQASSMTVERSSLEKDNNSPQERLDASHSSIGTFDRNTSQNKKNDKAQGNGALTGITSDNKKPSEATAARGVGSIPSFFTNINPLKAQVPPCNIFSKTEVSKFLGSSKISPPSHADYQMKRLESLAQFRNMHIRILQGHVVVSSVDDSVPKTSGLKSFNGSAHVDHPSGESQITVGGNGKLVSRNTSGSVRRAVNGFSEGEIHHLTNANVSTSAIVNSDSDNVTANSQRVEDGVVKAELDLYDEDLGSIEGNMCASSTGVVRVQSRKKAEMFLVRTDGISCSREKVTESSLAFSHPTTQQQMLMWKSMPKTVLLLKKLGEELMEEAKEVASFLYHQEKMTVLVEPDVHDIFARIPGLGFVQTFYSQDISDLHEKVDFVTCLGGDGVILHASNIFRGAVPPIVSFNLGSLGFLTSHSFGDYKQDLRQLIHGNTTRNGVYITLRMRLRCGIFRNGKAMPGKVFDILNEVVVDRGSNPYLSKIECYEHGRLITKVQGDGVIVATPTGSTAYSTSAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAELELKIPEDARSSAWVSFDGKRRQQLSKGDSVRIYMSQHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1116 1023 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 273 386 IPR029021 -
Lal18g1116 1023 PANTHER NAD KINASE 46 1023 - -
Lal18g1116 1023 MobiDBLite consensus disorder prediction 429 470 - -
Lal18g1116 1023 Pfam ATP-NAD kinase C-terminal domain 870 996 - -
Lal18g1116 1023 Gene3D - 850 990 IPR017437 GO:0003951|GO:0019674
Lal18g1116 1023 Pfam ATP-NAD kinase N-terminal domain 730 837 IPR002504 GO:0003951|GO:0006741
Lal18g1116 1023 Gene3D Protein tyrosine phosphatase superfamily 265 402 IPR029021 -
Lal18g1116 1023 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 718 1018 IPR016064 -
Lal18g1116 1023 Gene3D - 705 1015 IPR017438 -
Lal18g1116 1023 PANTHER NAD/NADH KINASE FAMILY PROTEIN 46 1023 - -
Lal18g1116 1023 MobiDBLite consensus disorder prediction 409 474 - -
Lal18g1116 1023 Hamap NAD kinase [nadK]. 716 1014 IPR002504 GO:0003951|GO:0006741
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1116 Lal-Chr18 14135789 14141841 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1116 K00858 - gmx:100820030 1569.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1116 18 14135789 14141841 Lal18g1116 18 14135789 14141841 ECH