Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1102 ATGTCTTGGGAAGGCCCTGAAGATATCTACCTTTCTACTTCACTTGCAAGTTATCTTGACAAGAAACTTCTTGTATTGCTGAGAGATGGTAGAAAGCTAATGGGGATACTTCGATCTTTTGATCAATTTGCTAATGCTGTTCTTGAGGGTGCCAGTGAGAGAGTTATTGTTGGTGATCTGTATTGTGACATCCCTTTGGGTCTTTATGTAATCCGTGGGGAGAATGTTGTTCTAATCGGTGAACTCGACTTGGAGAGAGAGGAACTTCCCCCACATATGACATGTGTTTCAACAGAAGAAATTAAGAGGGCACAGAAAGCAGATAGGGAGGCTTCAGATCTGAAAGGGACAATGAGGAAAAGAATGGAATTCCTTGACTTGGACTAG 387 0.4212 MSWEGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGASERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEREELPPHMTCVSTEEIKRAQKADREASDLKGTMRKRMEFLDLD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1102 128 CDD LSm1 12 82 IPR034104 GO:0000956
Lal18g1102 128 Gene3D - 12 125 - -
Lal18g1102 128 SMART Sm3 13 81 IPR001163 -
Lal18g1102 128 PANTHER U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM1 1 127 - -
Lal18g1102 128 PANTHER LSM1 1 127 IPR044642 -
Lal18g1102 128 Pfam LSM domain 14 80 IPR001163 -
Lal18g1102 128 SUPERFAMILY Sm-like ribonucleoproteins 13 83 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1102 Lal-Chr18 14049083 14052396 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1102 K12620 - tcc:18596249 238.039