Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1080 ATGCTTCCAAAGTTCATGAGCCCCTTCAAAATGGAAATCCAAGAAGAGAACAAAAGAAAGAAGCATGTGAGTTCAATAGAGAGTACCACCATGGATGTTGGTTTGAGGCTTCTCACTCAAATCACTAGCTCAAAGTGCAAATCAAATTCCAATATCCTTGTGAAATCTGCACTGAGATTAAAGCCGAACCAAACCACCTCTTTAGAGTTCTTTTCCTTCCTTAAAACTTGTACTCTATGCAACAAGCAACTCAACCTAGACAAAGATATCTACATGTACAGAGGTGATGAAGGTTTCTGCAGTGTAGAGTGCAGAAACAGACAAATAGTTTTGGATGAGATGAGAGAATTAGAGAGATCTACTAAGAAAATGGTAGCATCTTATAATAGGCAACATTGTAATGATGCATGTGAAGAGACTCGCCTTATACTTAAGGACCTCAGAATGCAGAGACTTAAATCCAAACCAATTCCTTGTACTCAAAACCTTTGGCTGTAA 498 0.3835 MLPKFMSPFKMEIQEENKRKKHVSSIESTTMDVGLRLLTQITSSKCKSNSNILVKSALRLKPNQTTSLEFFSFLKTCTLCNKQLNLDKDIYMYRGDEGFCSVECRNRQIVLDEMRELERSTKKMVASYNRQHCNDACEETRLILKDLRMQRLKSKPIPCTQNLWL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1080 165 ProSiteProfiles Zinc finger FLZ-type profile. 72 116 IPR007650 -
Lal18g1080 165 PANTHER FCS-LIKE ZINC FINGER 17 1 155 IPR044181 -
Lal18g1080 165 PANTHER FCS-LIKE ZINC FINGER 17 1 155 - -
Lal18g1080 165 Pfam zinc-finger of the FCS-type, C2-C2 72 114 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1080 Lal-Chr18 13868960 13870996 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1080 - - gmx:100816015 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0522 22 3467606 3468822 Lal18g1080 18 13868960 13870996 LSH