Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1078 ATGGATGCACTAGACAAAGCTTTTTCGGATCTTGTTGGCACCATCAAATCATGGATTCCCTGGCGACCCAAGCCAACAAATGTGTCCAGGGATTTTTGGATGCCCGATCGCAGTTGCAGAGTATGCTATGAGTGTGATTCCCACTTCACCGTATTTAATCGTAGGCACCACTGTCGTCTTTGTGGACGAATTTTCTGTGCCACATGTACAACAAACTCAATTCCTGCCCCATTTAGCGGCCAAGGAAACTCTTCGGATGAGTTGGAGAAGATTCGTGCATGCAATTATTGCTACAAGCAATGGGAGAAGGGCAAAGTCGCTCTTGATGACAATATTCAGCCTTCCAATCTTGATCGTAGTACTTCAACTTCAAGCGTGGCTAGCAGTAAAACCAGTGGAACTGCTACCAGTAGTAACATGACTCTTTGCTCCCTAGCATATTCAGTTGGGTCTTATCAACAGATGCAACAAGATTCCTCTCTGGACTTGTACCAATCACCTATGAGTGGAATAAGCAGTGAAGGAGAATGTTTATCAGCATTGGGAGAGACAGATAATCTTGTAGCAGACCTTGGGAATCCATTACCTAAGCAATATGATTACTCAATTAACAGGAGTGACAATAATGAGGATGAGTGTTGTCTATATCAGTCAGATTCTGATATGAGGCATTATGCTCCAGAGACTAGCTACTATGGACAGGCTGAGTTTGCTGGCATAAGCAACACCGGTGGCTCACATGAAGTGCATCCTGATGGAGAAAACATCAATCCGAAGTTCTCTTCAAAATACAGTTTTGGTGCCCAGGGTTTGGAAGGAGCCGCGATTGTTGGAAAAAATGAAGATGAACCTAATACATGTGATGAAAATGAAGCACCTTCCTCATTATATGTTTCAGAGGATGTCGATCTTGAACCTGTTGATTTCAGAAATAATGAACTTCTCTGGCTCCCTCCTGAACCAGAAGATGAGGAAGATGAGAGGGAAGCTACTTTGTTTGATGAGGATGATAATGATGTGAATTCTGTTGGAGAGCATCATCTCAGAGAAAGGTCTAGAGAGGAGCACAAGAAGGTAATGAAGAATGTAGTTGACGGGCACTTTAGGGCATTGGTAACTCAGCTGTTACAGGTCGAGAACCTACCAGTCGAATATAATGACAAAAACAGTTGGTTGGAGATAATCACGTCTCTGTCATGGGAAGCTGCTACTTTATTGAAGCCAGATATGAGCAAAGGTGGAGGGATGGACCTAGCTGATTATGTGAAAATCAAATGCATAGCATGTGGGAGCCGCATTGAAAGTATGGTGGTTAAAGGAGTTGTTTGTAAGAAAAATGTGGCTCATCGGCGAATGATGTCAAAAGTTGATGAAGCTCGCATTTTGATCCTTGGAGGGGCTCTTGAGTATCAGCGTGTTACCAACCTCTTGTCTAGTGTAGATACCCTATTGCAGCAGGAAATGGACCATTTGAAGATGGCAGTGGCAAAGATAGCATCACACCATCCAAATATCCTTTTGGTAGAGAAGTCAGTTTCTCGATATGCACAAGAATATCTTCTTGCGAAAGACATATCTCTGGTTCTTAATCTCAAGAGACCACTTTTGGAGCGCATAGCACGTTGCACAGGCACTCAAATAGTGCCTTCAATTGATCATTTGTCATCGCAAAAGTTGGGTTGCTGTGAAACATTCCATGTTGAAAAGTTTATTGAAGACCTAAGTCGTGCTGGTCAGGGTGGGAAAAAAACAGTGAAAACATTGATGTGTTTTGAAGGCTGCCCAAAACCATTAGGTTGCACTATTTTACTTAGAGGTGCTGGTGTGGATGAACTGAAGAAAGTAAAGCATGTGGTTCAGTATGGAGTTTTTGCAGCTTACCATTTGGCTATGGAGACATCTTTTCTTGCTGATGAAGGAGTATCCTTGCCAGAACTTCCGTTAAACAGTCTAGCCCTTCCAAATAAATCATCATCCATTCAGAGTTCCATCTCAACAGTTCCTGGTTTCAGTGCTCCTGGCAATGACAAGTCTCAGGGGCTTGAACCTGACACTGAACCACGGAGAACCAAAAGTGTCACAGTTACTGATCTAGCGTCATCAGCCAGCACTACAGGACCCTGTGCGCCTTCTTCTCAATCTATGCCACCTAGATCAAGTGTCAACCATTCAACTGCCTTTACCAACTCCATTGTTTCTTCGGGAAATTCAATTTCAGATTCATACCATACGAAGATTCTTCCATTTACCCGTAAAGACAGAAATGAAATGGACTCTGAACAACCTCTACTGGAAGAAACTTCCGCAGTGGACAACACTCTGGCAGTCATGGGTGATCCTACTTTAAATGGAAAATTAGATCTAGACATTTTAGCGGGTACTCCTCAAAATTGTAATAGAAAAGTAGATCAATTTGGTCGCTCTGAGATGCTATATCCAGAAGATGTCCAGAAACATTCCTCGAAGCCAGACATAACAACTGAAGATCCAGTTCCTCTAAAGGAAGAGTTTGCTCCATCACCCTCTGACCATCAAAGCATTTTGGTGTCTTTGTCCTCCCGATGCGTTTGGAAGGGAACTATGTGTGAGAGGTCCCACCTTTTTCGAATTAAATACTATGGCAGCTTTGACAAACCATTGGGTCGCTTTCTGCGGGACCATTTATTTGATCAAAGTTACCGGTGCCATTCGTGTGAAATGCCACCGGAAGCACATGTACATTGTTATACTCATCGACAGGGAACACTCACCATATGTGTCATGAAAATAACAGAAATTCTTCTACCTGGTGAAAGGGATGGCAAGATTTGGATGTGGCATAGGTGCTTGCGGTGTCCAAGAATCAATGGTTTTCCTCCTGCTACACAGAGAATAGTGATGTCTGATGCTGCGTGGGGTTTATCCTTTGGGAAATTTTTGGAGCTCAGTTTCTCAAACCATGCTGCAGCCAGCAGGGTAGCGTGCTGTGGCCATTCCTTACATAGAGATTGTCTTCGTTTTTATGGATTTGGGGAAATGGTTGCTTGTTTTCGATATGCATCAATTGATGTTCACTCTGTCTACCTGCCCCCACACAAATCGGTATTTGATTATGAGAATCAGGGCTGGATACAAAAAGAGGCATATGAGGTGGTTAACCGGGCCGAGTCTTTATTCTCTGATGTACTTAGTGGTCTTAGTCAAATCAGTGATAAAAGATCTAGTGCAGTCCCAATCGGAAGTGGCCTTAAAACACCTGAGTTAAGATGCCAAGTTGCTGAACTGGAGGGGATACTGCAAAAGGAGAAAGTGGAATTTGAGGAATCTGTTCACAACATTTTGAACCAAGAAAAGAGAAAGGGCCAACCTGGGATTGACATTCTAGAAATTAATCGATTACGGAGGCAGTTACTTTTCCAATCCTATATGTGGGATCACCGCCTTATTTGTGCAGCCAACTTAGCCAATTCCGGCAATGAAACTGGTTTAAGCAGTTCAGTTCCAGATGATAAGGAGAGACCTAATGATGAAAATCAGACAAGTGTGGCCTGTGTAGAAGAAAGGAGCCTTAGTAGTGTTAACCCCACTGACAGTGATCCAAAGGTTAACAAAAGCCCTAGCCTTGTTGGAGGAGGACAAGGAGGAGTTGATGGGAAAATTTTCCATTCTGATGCATTGCATGAAGAAATTGACATTGTCAAATATACAAATCATGTCAAAGAAGACCAATCTACTCTTTCAATCAACCAAAGTATAAGTCATCAAGCTGAGCTCGTCAAACCTGAATTGAGTATCCGCCGAACTGTCTCTGATGGGCAATTTCCTGTCATGCCTAGTTTGTCTGATACACTTGATGCCAAATGGATAGGTGAAGACCACTTAGGATTTGGAATTCAAAAGGACATCACTTCTGTAAATCCTGATACGTTTATGGCAGATTATTTAATAACCACTGTACATAAAGAAGCAAACAATTTAGGGGATCTTGCATATGACCAGAATGGCCCCAAGAGTATCTATTTAACTTCTAAAGGTCATGATAATATGGAAGACTCTTTAAGCTGGTTAGGAATGCCCTTCTTAAACTTCTATCGCCAATTTAATATGAACTTTTTTGCTAGTACACAGAACTTTGATACAATAGTTGATTACAATCCTGTTTATCTATCATCCTTCCGAAAGCTGGAACTGCAAGGTAGAGCAAGGCTGCTTCTGCCAATTGGTGTTAATGACACTGTAATTCCAGTATATGATGATGAGCCTTCAAGTATTATAGCTTATGCCTTAACGTCACCAGAATATCATTTCCAATTGACCGATGAAGGAGAGAGACCAAAAGATGGGATTGAATTGGCTTCGTCATATTTTTCTGACTCAAGCACCTTTCATTCATTCTCATCTGCTGATGAAACAGCTTTTGATTCTCAGAAAAGTTTTGGGTCGATAGAGGATACGTTATTGTCCATTTCTGGGTCTCGTACCTCATCAATGCTGGACCCCATGTTATATACAAAGGCTATGCATGCCAGAATTTCCTTCGGAGAAGATGGTCCCCTTGGTAAGGCAAAATATTCTGTGACTTGTTACTACGCCAAACGATTTGAAGCCTTAAGAAGGGTCTGTTGTCCTTCGGAGCTTGATTATATAAGGTCTCTGAGTCGCTGTAAGAAATGGAGAGCTCAAGGTGGTAAGAGTAATGTATTCTTTGCAAAAACCTTGGATGATCGATTTATCATCAAGCAAGTAACCAAAACAGAGTTGGAATCATTCATCAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGATTCCATAGGCACAGGAAGTCCAACATGCCTGGCAAAGATCCTTGGCATATACCAGGTTACATCAAAGCATCTTAAAGGAAGGAAAGAATCAAAGATGGATGTTTTGGTTATGGAGAATATTCTATTTAGGAGGACAGTGACGCGACTTTACGATCTTAAAGGATCTTCCAGGTCTCGGTATAATCCAGATAGTAATGGGAAAAACAAAGTTCTGCTTGACCAGAACTTAATTGAAGCAATGCCAACTTCTCCTATTTTTGTGGGAAACAAAGCAAAACGATTGTTAGAGAGAGGTGTCTGGAATGACACTGGTTTTCTTGCATCAGTTGATGTAATGGACTATTCTTTACTTGTTGGGGTGGATGAAGAGAAACATGAGTTAGTAATTGGAATCATTGACTTCATGAGACAGTATACATGGGACAAACATCTTGAAACATGGGTCAAAGCTTCAGGCATCCTTGGAGGACCAAAGAACACACCTCCAACAGTTATATCACCCAAACAATACAAGAAAAGGTTCAGAAAAGCAATGACAACTTACTTTCTTATGCTTCCAGATCAATGGTCTCCACCATCTATCATTCATAGTGAACACAACAAGACACAATTGAAGACTTTAGCTGAATGA 5418 0.4171 MDALDKAFSDLVGTIKSWIPWRPKPTNVSRDFWMPDRSCRVCYECDSHFTVFNRRHHCRLCGRIFCATCTTNSIPAPFSGQGNSSDELEKIRACNYCYKQWEKGKVALDDNIQPSNLDRSTSTSSVASSKTSGTATSSNMTLCSLAYSVGSYQQMQQDSSLDLYQSPMSGISSEGECLSALGETDNLVADLGNPLPKQYDYSINRSDNNEDECCLYQSDSDMRHYAPETSYYGQAEFAGISNTGGSHEVHPDGENINPKFSSKYSFGAQGLEGAAIVGKNEDEPNTCDENEAPSSLYVSEDVDLEPVDFRNNELLWLPPEPEDEEDEREATLFDEDDNDVNSVGEHHLRERSREEHKKVMKNVVDGHFRALVTQLLQVENLPVEYNDKNSWLEIITSLSWEAATLLKPDMSKGGGMDLADYVKIKCIACGSRIESMVVKGVVCKKNVAHRRMMSKVDEARILILGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVAKIASHHPNILLVEKSVSRYAQEYLLAKDISLVLNLKRPLLERIARCTGTQIVPSIDHLSSQKLGCCETFHVEKFIEDLSRAGQGGKKTVKTLMCFEGCPKPLGCTILLRGAGVDELKKVKHVVQYGVFAAYHLAMETSFLADEGVSLPELPLNSLALPNKSSSIQSSISTVPGFSAPGNDKSQGLEPDTEPRRTKSVTVTDLASSASTTGPCAPSSQSMPPRSSVNHSTAFTNSIVSSGNSISDSYHTKILPFTRKDRNEMDSEQPLLEETSAVDNTLAVMGDPTLNGKLDLDILAGTPQNCNRKVDQFGRSEMLYPEDVQKHSSKPDITTEDPVPLKEEFAPSPSDHQSILVSLSSRCVWKGTMCERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYRCHSCEMPPEAHVHCYTHRQGTLTICVMKITEILLPGERDGKIWMWHRCLRCPRINGFPPATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVACCGHSLHRDCLRFYGFGEMVACFRYASIDVHSVYLPPHKSVFDYENQGWIQKEAYEVVNRAESLFSDVLSGLSQISDKRSSAVPIGSGLKTPELRCQVAELEGILQKEKVEFEESVHNILNQEKRKGQPGIDILEINRLRRQLLFQSYMWDHRLICAANLANSGNETGLSSSVPDDKERPNDENQTSVACVEERSLSSVNPTDSDPKVNKSPSLVGGGQGGVDGKIFHSDALHEEIDIVKYTNHVKEDQSTLSINQSISHQAELVKPELSIRRTVSDGQFPVMPSLSDTLDAKWIGEDHLGFGIQKDITSVNPDTFMADYLITTVHKEANNLGDLAYDQNGPKSIYLTSKGHDNMEDSLSWLGMPFLNFYRQFNMNFFASTQNFDTIVDYNPVYLSSFRKLELQGRARLLLPIGVNDTVIPVYDDEPSSIIAYALTSPEYHFQLTDEGERPKDGIELASSYFSDSSTFHSFSSADETAFDSQKSFGSIEDTLLSISGSRTSSMLDPMLYTKAMHARISFGEDGPLGKAKYSVTCYYAKRFEALRRVCCPSELDYIRSLSRCKKWRAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSDSIGTGSPTCLAKILGIYQVTSKHLKGRKESKMDVLVMENILFRRTVTRLYDLKGSSRSRYNPDSNGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERGVWNDTGFLASVDVMDYSLLVGVDEEKHELVIGIIDFMRQYTWDKHLETWVKASGILGGPKNTPPTVISPKQYKKRFRKAMTTYFLMLPDQWSPPSIIHSEHNKTQLKTLAE 1805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1078 1805 SMART PIPK_2 1488 1779 IPR002498 GO:0016307|GO:0046488
Lal18g1078 1805 SMART fyve_4 28 103 IPR000306 GO:0046872
Lal18g1078 1805 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1454 1778 IPR002498 GO:0016307|GO:0046488
Lal18g1078 1805 Gene3D - 1637 1779 - -
Lal18g1078 1805 Pfam FYVE zinc finger 33 102 IPR000306 GO:0046872
Lal18g1078 1805 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 1 1797 - -
Lal18g1078 1805 MobiDBLite consensus disorder prediction 1152 1207 - -
Lal18g1078 1805 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Lal18g1078 1805 Coils Coil 1797 1805 - -
Lal18g1078 1805 Pfam TCP-1/cpn60 chaperonin family 388 631 IPR002423 GO:0005524
Lal18g1078 1805 MobiDBLite consensus disorder prediction 1171 1196 - -
Lal18g1078 1805 CDD PIPKc_PIKfyve 1515 1778 IPR044769 GO:0000285
Lal18g1078 1805 SUPERFAMILY FYVE/PHD zinc finger 31 103 IPR011011 -
Lal18g1078 1805 MobiDBLite consensus disorder prediction 750 769 - -
Lal18g1078 1805 MobiDBLite consensus disorder prediction 692 724 - -
Lal18g1078 1805 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1553 1720 IPR002498 GO:0016307|GO:0046488
Lal18g1078 1805 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1478 1635 IPR027484 -
Lal18g1078 1805 MobiDBLite consensus disorder prediction 663 724 - -
Lal18g1078 1805 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1797 - -
Lal18g1078 1805 MobiDBLite consensus disorder prediction 113 137 - -
Lal18g1078 1805 MobiDBLite consensus disorder prediction 339 354 - -
Lal18g1078 1805 SUPERFAMILY GroEL apical domain-like 434 606 IPR027409 -
Lal18g1078 1805 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 107 IPR013083 -
Lal18g1078 1805 MobiDBLite consensus disorder prediction 318 338 - -
Lal18g1078 1805 CDD Fab1_TCP 369 640 - -
Lal18g1078 1805 Gene3D GroEL 433 606 IPR027409 -
Lal18g1078 1805 SUPERFAMILY SAICAR synthase-like 1511 1778 - -
Lal18g1078 1805 MobiDBLite consensus disorder prediction 317 354 - -
Lal18g1078 1805 MobiDBLite consensus disorder prediction 112 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1078 Lal-Chr18 13836617 13847940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1078 2 1799 EF-hand Containing Proteins AT3G14270 57.584 0.0 1940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1078 K00921 - gmx:100819364 2712.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0527 22 3496695 3507599 Lal18g1078 18 13836617 13847940 LSH