Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1047 ATGGGAAGCAACCAGAACATGAACCAAACAACAACAATGAAATCTGAGTTTGAGGACTTGCTTCCAGTGATGGCAGAGAAGCTAGATGTAGAAGCCTTTATGTCTGAACTATGTTGTGGTTTCAAGCTTCTAGCTGACCAAGAAAAGGGTTTAATAACAAGTGAGAGTTTGAGGAAAAACTCAGCTCTTCTTGGAATGGATGGTATGAGCAAGGAAGATTCAGAGGCTATGGTTAGACAAGGTGATCTTGATGGAGATGGGAAACTGAATGAGACTGAGTTTTGCATTCTAATGGTGAGACTTAGCCCTGGGATGATGGAAGATGCTGAATCCTGGTTGGAGAAGGCTATTGAGGAAGAGATTAGGAAATCATAG 375 0.4187 MGSNQNMNQTTTMKSEFEDLLPVMAEKLDVEAFMSELCCGFKLLADQEKGLITSESLRKNSALLGMDGMSKEDSEAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIEEEIRKS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1047 124 SUPERFAMILY EF-hand 22 123 IPR011992 -
Lal18g1047 124 PANTHER CALCIUM-BINDING PROTEIN KIC 6 123 IPR044205 GO:0005509
Lal18g1047 124 Pfam EF-hand domain pair 48 100 IPR002048 GO:0005509
Lal18g1047 124 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Lal18g1047 124 Gene3D - 14 124 - -
Lal18g1047 124 PANTHER CALCIUM-BINDING PROTEIN KIC 6 123 - -
Lal18g1047 124 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1047 Lal-Chr18 13468119 13468493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1047 10 121 EF-hand Containing Proteins AT2G46600 70.536 3.34e-57 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1047 K24345 - gmx:100802677 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1047 18 13468119 13468493 Lal18g1047 18 13468119 13468493 ECH