LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal18g1027	ATGGACTCTGAAGGCCAAAAGTTTGGAGGAGGACCAAGGGAATTGACAGGTGCTGTGGATCTTATAAGTCAGTTCAAATTGCTACCACACTTCGAGTTCTTCTGCAAGAAACCACTTCCTGTGTCAGTTGCAGACACACACTATCTCCACAATGTGGTAGGAGATACAGAAATAAGAAAAGGAGATGGGATGCAGGTTGATCAACTTATTCAGAATACATCTTCCTTTAGAGATACAAGTGCTCGTATACAGCCTTTTGACCTCGATATTCTCAAGGAGGCTTTTCAACTAAGAGAAACAGGTCCCGTCGATTTGCCCCCGGGGGAGAAAGGGATTTCAACTATTGCTGGAAAATCAAAAGGTGAGTCTAAAGACAAGGAGAAGAAGCATAAAAAGCATAAAGACAGGGACAGGGAGCATAAGAAGCACAAGCATCGTCATAAAGACCGAAGCAAAGATAAGGACAAGGATAAGGATAAAAAGAAAGATAAAAGTGGTCATCGTGATTCCAGTGCTGATCACTCAAAGAAACACCATGATAAGAAAAGGAAGCATGATGGAGATGATGATATTAATGATGTGCATAAACACAAAAGGAGTAAGGTAATTAAAGGAAAGAAGCTTTGTCTCGGACTCTCGCATAAGAGCTCAAAAATTGACGAATTGGGAGCTATTAGAGTCGCTGGCTAA	690	0.413	MDSEGQKFGGGPRELTGAVDLISQFKLLPHFEFFCKKPLPVSVADTHYLHNVVGDTEIRKGDGMQVDQLIQNTSSFRDTSARIQPFDLDILKEAFQLRETGPVDLPPGEKGISTIAGKSKGESKDKEKKHKKHKDRDREHKKHKHRHKDRSKDKDKDKDKKKDKSGHRDSSADHSKKHHDKKRKHDGDDDINDVHKHKRSKVIKGKKLCLGLSHKSSKIDELGAIRVAG	229

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal18g1027	229	PANTHER	LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN	1	228	IPR019403	GO:0003712\|GO:0006357\|GO:0016592
	Lal18g1027	229	PANTHER	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 19A-LIKE ISOFORM X1	1	228	-	-
	Lal18g1027	229	MobiDBLite	consensus disorder prediction	125	151	-	-
	Lal18g1027	229	MobiDBLite	consensus disorder prediction	152	197	-	-
	Lal18g1027	229	MobiDBLite	consensus disorder prediction	99	203	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal18g1027	Lal-Chr18	13255066	13259288	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal18g1027	-		-	gmx:100814559	270.011

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal6g0661	6	4353519	4358602	Lal18g1027	18	13255066	13259288	LSH
	Lal22g0597	22	4207691	4212348	Lal18g1027	18	13255066	13259288	LSH