Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1025 ATGGAGGTAGGGTTCTTGGGTCTTGGGATAATGGGCAAGGCTATGTCCATAAATCTGCTACGCCATGGCTTCAAGGTCACTGTTTGGAACAGGACCCTCTCAAAGTGTGATGAGCTTGTGGAACATGGTGCTTCAATTGGAGAAACCCCGTCAGCTGTAGTCAAGAAATGCAAGTATACAATTGCAATGTTATCTGATCCTTCGGCTGCTCAGTCGGTTATCTTTGACAAAGATGGTGTACTTGAGCAAATTTCCAATGGAAAAGGTTATATTGACATGTCAACAGTTGATGCCGAAACATCTTTGAAGATATCTGAGGCAATCAAAGCAAAAGGTGGTGACTTCCTCGAAGCTCCTGTTTCAGGTAGCAAAAAGCCTGCAGAAGATGGCCAACTAGTAATACTTGCTGCTGGGGACAAGGCATTGTATGACGAAATACTTCCAGCATTTGTTGTACTGGGTAAGAAGTCTTTCTATCTCGGTGAGGTTGGAAATGGTGCAAAAATGAAACTTGTTGTTAACATGATAATGGGAAGTATGATGAATGCTTTCTCTGAGGGACTCACACTAGCTGAAAGAAGTGGTTTGAACCCTGGAACTCTTCTTGATGTGCTGGATCTCGGTGCTATCAGTAACGGCATGTTTAAGCTGAAAGGACCGACAATGCTCAAAAACAGTTACTCCCCAGCTTTTCCACTGAAACATCAGCAGAAGGATATGAGATTGGCTCTTGCTCTTGGAGATGAAAATGCTGTACCAATGCCTGTAGCAGCTGCAGCAAACGAGGCTTTCAAGAAAGCCAGAAGCTTGGGGTTGGGAGACCTTGATTTTTCAGCAGTGCATGAGACTTTGAAAGCTCTTGATCATTCAACCTAA 876 0.4384 MEVGFLGLGIMGKAMSINLLRHGFKVTVWNRTLSKCDELVEHGASIGETPSAVVKKCKYTIAMLSDPSAAQSVIFDKDGVLEQISNGKGYIDMSTVDAETSLKISEAIKAKGGDFLEAPVSGSKKPAEDGQLVILAAGDKALYDEILPAFVVLGKKSFYLGEVGNGAKMKLVVNMIMGSMMNAFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPTMLKNSYSPAFPLKHQQKDMRLALALGDENAVPMPVAAAANEAFKKARSLGLGDLDFSAVHETLKALDHST 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1025 291 PIRSF HIBADH 1 291 IPR015815 GO:0016491
Lal18g1025 291 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 IPR006115 GO:0050661
Lal18g1025 291 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 162 286 IPR008927 -
Lal18g1025 291 PANTHER OXIDOREDUCTASE GLYR1-RELATED 2 284 - -
Lal18g1025 291 Gene3D - 1 163 - -
Lal18g1025 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 163 IPR036291 -
Lal18g1025 291 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 5 18 IPR002204 GO:0016491
Lal18g1025 291 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 282 IPR029154 GO:0051287
Lal18g1025 291 Gene3D - 164 286 IPR013328 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1025 Lal-Chr18 13243436 13248871 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1025 K18121 - gmx:100802847 509.22