Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0851 ATGGCGCAAGCACAGGATGTAAGAACAAATGCAGAATTTTCGAAGTTTGATGACTACTATGAAACCATCCAATCCAGAAATAAATTACCAAAGGCATTGCAGGAGACATTGACAGATGCACTTGCAAAGATTCCTGTTTCGTCATTTCCGCGAGTTCCCGGAGGAAAAGTGATTGAAATTCTAGCATACACTCCCGTTGGCGAAGCGGTTAAGGTTCTATCCGAAAACAACATTTTAGCAGCACCAGTTAAAGATCCAGAAGCAGGGACTAGTTCAAATTGGAGAGATGGGTACCTTGGCATCATAGATTATTCAGCTATCATTCTCTGGGTGTTGGAGACTGCAGAAATTGCGGCAGCTGCCCTATCAGCCGGTACAGCAACGGCTGCTGGAGTTGGTACGGGAACTATTGGTGCTCTAGGAGCACTGGCATTGGGAGTAACCGGTCCTGCAGCGATTGCTGGACTAACTGCTGCTGCTGCAGGTGCTGCAGTAGTAGGTGGAATTGCTGTAGAGAAAGGGATGGGTAAAGATGCTCCTCATGTTGCTGATAAACTGGGTGGGGACTTCTACAAAGTAATACTGCAAGAAGAACCCTTTAAGTCGACAACGGTAAAATCAATACTTAAACAATATCGGTGGGCTCCTTTTGTTCCAGTTGCAAGAAACAGCAGTATGTTGACTGTCATGCTGCTTCTTTCAAAATATAGGCTGAGGAATGTACCTGTAATAGAACCGGGCAAACCCGACATTGTGAACTTCATTACTCAGTCTGCGGTTGTTCAAGGTCTCGAGGGATGCAAAGGAAGAGACTGGTTTGATTGCATTGCAGAAAGGCCTATATGTGATCTTGGACTTCCTTTTATGTCTCCTCATGATGTTATTAGTGTCTCAAGCAATGACTTGATTCTTGAAGCTTTCAAGCAGATGAGGGATAATAAAATCGGCGGTCTTCCCGTAGTAGAGGGGCCAAATAAGAGAATTGTTGGAAGCTTGAGTATAAGAGACATCAGACACTTGTTGCTAAGGCCTGAGCTTGTCTCCAATTTTAGGAAGCTCACTGTGATGGATTTCATAACCGAAATTGCCTCCTTAAACCGAGATGGCAGAAAAGTTATCCGACCGATAACATGCAAGCCTGACTCAACGCTGCAGAGTGTGATCCTCAGTCTTGCTTCTCAATTTATTCACAGGATTTATGCAGTAAATGAACAAGAGGAAGTAATCGGAGTCATTACACTGAGAGATGTAATCTCTTCTTTCATCACTGAACCTTCTTACCATTTTGATGATTACTATGGATTTGCAGTGAAAGAGATGTTGAATCAGTGA 1332 0.4362 MAQAQDVRTNAEFSKFDDYYETIQSRNKLPKALQETLTDALAKIPVSSFPRVPGGKVIEILAYTPVGEAVKVLSENNILAAPVKDPEAGTSSNWRDGYLGIIDYSAIILWVLETAEIAAAALSAGTATAAGVGTGTIGALGALALGVTGPAAIAGLTAAAAGAAVVGGIAVEKGMGKDAPHVADKLGGDFYKVILQEEPFKSTTVKSILKQYRWAPFVPVARNSSMLTVMLLLSKYRLRNVPVIEPGKPDIVNFITQSAVVQGLEGCKGRDWFDCIAERPICDLGLPFMSPHDVISVSSNDLILEAFKQMRDNKIGGLPVVEGPNKRIVGSLSIRDIRHLLLRPELVSNFRKLTVMDFITEIASLNRDGRKVIRPITCKPDSTLQSVILSLASQFIHRIYAVNEQEEVIGVITLRDVISSFITEPSYHFDDYYGFAVKEMLNQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0851 443 Gene3D - 7 267 IPR046342 -
Lal18g0851 443 Gene3D - 276 424 IPR046342 -
Lal18g0851 443 ProSiteProfiles CBS domain profile. 369 431 IPR000644 -
Lal18g0851 443 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 12 442 - -
Lal18g0851 443 PANTHER BNAANNG38820D PROTEIN 12 442 - -
Lal18g0851 443 Pfam CBS domain 289 342 IPR000644 -
Lal18g0851 443 Pfam CBS domain 374 419 IPR000644 -
Lal18g0851 443 SUPERFAMILY CBS-domain pair 36 262 IPR046342 -
Lal18g0851 443 SMART cbs_1 374 422 IPR000644 -
Lal18g0851 443 SMART cbs_1 56 112 IPR000644 -
Lal18g0851 443 SMART cbs_1 293 342 IPR000644 -
Lal18g0851 443 SMART cbs_1 216 265 IPR000644 -
Lal18g0851 443 CDD CBS_pair_SF 292 418 - -
Lal18g0851 443 ProSiteProfiles CBS domain profile. 289 347 IPR000644 -
Lal18g0851 443 SUPERFAMILY CBS-domain pair 275 430 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0851 Lal-Chr18 11041950 11045036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0851 - - gmx:100800376 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0851 18 11041950 11045036 Lal18g0851 18 11041950 11045036 ECH