Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0742 ATGTCCCACTCCAAAACCCCAATCAAATCCACCACCACCACCACCACCACAATCACAATCACCCTCTCTTCCAAATTCATCCCAAAATTCCATCAACACATAAAACTCCACCCAACCCCATATCCCAAACCCTTCTCCTTCAAACTCACTTCCTCCAACTCCAACTCCCCAAACCCCAAAAACCCATTCAAAACCCTAATCTCAATCCCTCAATGGGCAGACAACATCAAAGAACTCGGTATGCAAAAGAACCGCATACTCTATACTCACTCTCTGTGGCTCCAACACCGTTCCTCTCTCCGCCACATCCGCCACTTCCTCTCTTCCCTCTCCTCCCGTGTCATCCTCTCCCTCATCCCTCCCGTCCTCGCCTTCACTGCCTTCGCCGCTGCCATTGCTTCTTACAATTCCCTCGTTTTGACCAACTGCCTGCCTGAATTCTTCCCTGTCCTTAGAGCCTCGTCGCTTCCATATCAGCTCACCGCGCCTGCGCTGGCGCTGCTGCTGGTTTTCAGGACGGAAGCGTCGTATTCCAGGTTTGTTGAAGGGAAGAAGGCATGGACTAAGGTGATTGCTGGTGCTCATGATTTTGCTAGGCAGGTTATGGCTTCTGTTGAGAGTCACCATGATTATCCGATCAAGAAAGCGCTTTTGCAGTATATCATTGCGTTTCCTATTGTTCTTAAGTGTCATGTGCTATATGGTTCAGATGTCAGGAGTGATCTTCAGCATATGTTAGAAGTAGATGACCTAACAGTAATCATGAATTCGAAACATCGGCCTCGCTGCATTATTGAGTTTATATCACAAAGCATTCGATTGCTAAAGTTGGAGGATTCCAGAAGAATTGTTTTGGAATCAAAGATCTCTTGTTTTCATGAAGGAATTGGCATCTGTGAACAACTTATGGGTATTCCCATTCCATTATCATATACTCGCTTGACCTCAAGGTTTCTTGTCCTATGGCACTTGACACTTCCTATCATACTTTGGGATGATTGTCACTGGATTGTGGTTCCCGCAACCTTTATTAGTGCTGCTTCTTTGTTCTGCATAGAAGAAGTTGGAGTTCTTATAGAGGAGCCATTTCCTATGCTTGCACTTGGTGAACTATGCAAAAAGGCCCACAATGACATTGAAGAAGCAATTGCATCTGAAAATTTAATTCACTCACAACTTGTTGCAAAGAGAAAGAGCCACTCCAAAGCACATTCACCAAATGGCTGGCCTAACTCTTAG 1239 0.4544 MSHSKTPIKSTTTTTTTITITLSSKFIPKFHQHIKLHPTPYPKPFSFKLTSSNSNSPNPKNPFKTLISIPQWADNIKELGMQKNRILYTHSLWLQHRSSLRHIRHFLSSLSSRVILSLIPPVLAFTAFAAAIASYNSLVLTNCLPEFFPVLRASSLPYQLTAPALALLLVFRTEASYSRFVEGKKAWTKVIAGAHDFARQVMASVESHHDYPIKKALLQYIIAFPIVLKCHVLYGSDVRSDLQHMLEVDDLTVIMNSKHRPRCIIEFISQSIRLLKLEDSRRIVLESKISCFHEGIGICEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALGELCKKAHNDIEEAIASENLIHSQLVAKRKSHSKAHSPNGWPNS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0742 412 Pfam Bestrophin, RFP-TM, chloride channel 96 366 IPR021134 GO:0005254
Lal18g0742 412 PANTHER UPF0187 PROTEIN YNEE 16 408 IPR044669 -
Lal18g0742 412 PIRSF UCP016988 6 412 IPR024701 GO:0005247|GO:0042548
Lal18g0742 412 PANTHER BESTROPHIN/UPF0187-RELATED 16 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0742 Lal-Chr18 8763253 8769870 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0742 K08994 - gmx:100790216 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0742 18 8763253 8769870 Lal18g0742 18 8763253 8769870 ECH