Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0661 ATGGCTTCAATCTCCAAACTCTCAATAGCAAACCCAGGAGCTCTTTCTCTATCACAATCACAATCACTTCGCCCTTCAAAAAAGTGCTTTTTCATCGCTTTTCAACCTTCCGCTTTTTCCAAAACCAACTACCTCTCTTCTTCCCTCACAACCCTCAACCCCGTCAAAACCTCTCTGCGAATTAGATGCTCTCAAACAGATGGAAATGGAATTGCTGCAAAGAGGACAGTACTTCATGATCTTTATGAGAAAGAAGGACAGAGCCCATGGTACGATAATCTCTGCCGACCTGTCACTGATCTGCTTCCTCTTATTGCAAGTGGTGTCAGAGGTGTCACTAGCAACCCTGCGATCTTCCAGAAAGCTATATCATCTTCAGATGCTTACAATGATCAGTTCAGAGAACTAGTGCATGCAGGGAAAGACATTGATAGTGCATATTGGGAACTAGTTGTGAAAGATATTCAAGATGCTTCCAAGTTATTTGAACCCATCTATGACCAAACAGACGGTGCAGATGGCTATGTTTCTGTTGAAGTATCTCCCAGGCTCGCTCATGATACTGAGGGAACCATAAAAGATGCAAAGTGGCTTCATAAAGTTGTTGATCGCCCCAATGTGTACATAAAGATTCCAGCTACAGCTGCATGTGTCCCTTCAATTAAGGAAGTAATTGCAAATGGGATAAGCGTGAACGTCACTCTGATATTCTCGCTCGCAAGATATGAAGCTGTAATTGACGCATACTTGGATGGTCTTGAGGCATCTGGCCTAGATGATCTCTCTAGAGTCACAAGTGTTGCTTCTTTCTTTGTTAGTCGAGTGGACACTCTGATCGACCAGTTGCTTGAGAAAATTGGCACCCCAGAGGCCCTTAATCTACGTGGGAAGGCAGCTGTAGCCCAAGCAGCCCTGGCATACCAGCTTTACCAAAGGAAATTCTCTGGTCCAAGATGGGAGGCTCTGGTTAAAAAAGGAGCCAAGAAGCAAAGGCTCCTCTGGGCTTCAACCAGTGTCAAGAATCCTGCCTATCCTGACACCTTATATGTTGCTCCTCTTATTGGACCTGACACTGTATCAACCATGCCAGACCAAGCCCTTCAAGCATTCATCGATCACGGTATTGTGTCGAGAACAATTGATTCAAATGCATCTGAAGCTGAGGGGATTTACAATGCTCTACAGAAATTGGGTATTGACTGGAAGGTTGTTGGTGACCAGCTTGAAGTTGAAGGAGTGGATTCATTTAAGAAGAGTTTTGATAGCCTCCTCCATTCTCTGGAAGAGAAGGCAAATTCTCTTAAGTTGGTTAGCCAGTGA 1320 0.4439 MASISKLSIANPGALSLSQSQSLRPSKKCFFIAFQPSAFSKTNYLSSSLTTLNPVKTSLRIRCSQTDGNGIAAKRTVLHDLYEKEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSDAYNDQFRELVHAGKDIDSAYWELVVKDIQDASKLFEPIYDQTDGADGYVSVEVSPRLAHDTEGTIKDAKWLHKVVDRPNVYIKIPATAACVPSIKEVIANGISVNVTLIFSLARYEAVIDAYLDGLEASGLDDLSRVTSVASFFVSRVDTLIDQLLEKIGTPEALNLRGKAAVAQAALAYQLYQRKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFIDHGIVSRTIDSNASEAEGIYNALQKLGIDWKVVGDQLEVEGVDSFKKSFDSLLHSLEEKANSLKLVSQ 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0661 439 PANTHER BNAA08G02750D PROTEIN 1 438 - -
Lal18g0661 439 PANTHER TRANSALDOLASE 1 438 IPR001585 GO:0005975
Lal18g0661 439 PIRSF Trnald_Bac_Plnt 67 439 IPR004732 GO:0004801|GO:0005737|GO:0006098
Lal18g0661 439 SUPERFAMILY Aldolase 84 430 - -
Lal18g0661 439 CDD Transaldolase_like 88 422 IPR004732 GO:0004801|GO:0005737|GO:0006098
Lal18g0661 439 ProSitePatterns Transaldolase signature 1. 111 119 IPR018225 GO:0005975
Lal18g0661 439 Hamap Transaldolase [tal]. 78 437 IPR004732 GO:0004801|GO:0005737|GO:0006098
Lal18g0661 439 Gene3D Aldolase class I 76 431 IPR013785 -
Lal18g0661 439 Pfam Transaldolase/Fructose-6-phosphate aldolase 104 426 IPR001585 GO:0005975
Lal18g0661 439 TIGRFAM tal_mycobact: transaldolase 88 425 IPR004732 GO:0004801|GO:0005737|GO:0006098
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0661 Lal-Chr18 5697049 5702213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0661 K00616 - gmx:100807267 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0661 18 5697049 5702213 Lal18g0661 18 5697049 5702213 ECH
Lal18g0661 18 5697049 5702213 Lal6g1745 6 20135176 20147074 LSH