Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0548 ATGATGTGGAAGCGGGACACTACCAACTCACACTATCATTTTCATCCGATCTCAGCTCCGCCGTATACGGCGGTGCCTCTCTGTCTTCCATCTCCCCTTTTCCGAGTTGACTATCATTCTTTATGGAAAAAACTCTTCTTTACAACATCAAGTTCCAGCATTCAAATTACCCGGTTTCATTTTTCTTACATGTATCCTGATAGTTTACATGCCGAGATGGCTGTTGCGACCTTCAAAGGACCCCCTAGTGAGTGTTGTGGAAATAAGAAAATGGAAAGAAAGCCTTCTGGGAGGAGACGCGTATATGTTCAGACTGAAACTGGGTGTGTTTTAGGGTTGGAGCTAGATAGAAGTGACAATGCTCATACTGTGAAGAGGAAATTACAGGTGGCATTCAATGTCCCTATTGAGGAAAGCTCACTTATATGCGGTGATATGGTCTTGAAAAATGATTTAAGTGTGGTTAGAAATGATTCTCCACTTCTTCTCACTAGGAACTTTTTATATAGGAGTTCGTCTACCCCTTGTCTTTCACCTACTGCTACAGATCTTCAGCAGAGGGATCAGAGTGGGCCTATTGAGATTATTGGTTGCTCAGATATATTTTCTGGGACAAAACAACTGGTTAAGGATATTATGATGGGAATAAAAGTTGGCATTGAACCGATCCCCATCCAGAGTGGATTGGGAGGTGCATATTATTTTAGGAACAGCCACGGCGAAAATGTTGCCATTGTGAAACCAACAGATGAGGTACCTTATGCGCCAAACAATCCGAAAGGTTTTGTTGGCAAAGCCCTTGGGCAACCAGGACTGAAGCGTTCGGTGAGGGTTGGGGAGACTGGTTTCAGAGAGGTCGCAGCTTACCTTCTTGACCATAATCATTTTGCCAATGTGCCTTGTACTGCCCTTGTAAAGGTGAGACATTCTATTTTTAATGTTAATGACAGGGTTAATGGTAATATGCATCATAACAAGGCGCAAATAAGCAAGATTGCATCACTGCAGCAGTTCATTCCTCATGATTTTGATGCAAGTGATCATGGAACTTCTAGTTTTCCTGTTGCTGCTGTTCATAGGATTGGTATTTTAGACATACGAATCTTAAATACGGACAGACATGCAGGGAATCTTCTGGTCAGGAAGCTTGAAGGACTTGGAAGGTTTGATCAGGTGGAGCTTGTTCCCATTGATCATGGTCTTTGCCTTCCCGAAAGTTTGGAAGATCCTTATTTTGAATGGATCCATTGGCCTCATGCATCAATTCCTTTCTCAGAGGATGAGCTCAATTATATATATCACCTGGATCCGTTTCGTGATTCAGAACTGCTTAGAAGGGAGCTGCCCATGATCCGAGAAGCATGCTTGCGTGTTTTGGTTCTTTGCACTGTCTTCCTTAAGGAAGCAGCAACCTTTGGTTTTTGTCTTGCTGAGATTGGTGAGATGATGAGTAGAGAATTCCTGGGTCATGATGAAGAGCCTAGTGAGCTTGAGCTTATATGTATTGAAGCAAAGAAACTGTTAAATGAGGAAGAAATCTCTTCTTTTGATGCAGAAATAGGAGACAGAGATGTGACTCTGTTTCAGTTAGATTGCGAAGATCAGGATTTGGACTTCACTGGAAATATAGAAGAGACAATGACAGTAATGCCACCTTTTCATCTTGCAGCAAAATGTGGAAACACCAGAAATCCACTCTTTAAACTTGAGGAAAGTGTGTTGGAGGAAGAGTCTGGGAATGAAGGAGAGTTAACCTTTGGTGCCGATGAATACACTGACACTGTAGGAAATTGGATGCCTAATATTTCAAAGCTATCTCTGTCTATGAAAAACACTAGATTTGGCGAGAAAAGTTGGAAGCACTTGGGTGTAAAGCAAAAGAGCAGCTTTTTGGCAGGTACATCATCAAGAAACATGAGTGTGAATGAGTTGGCTGTAAACTCTACTTTCGTGAAGCTGACTGATATGGATGAAGAGAAGTGGAACCAGTTTCTTGAGAATTTTCAAAGGTTGTTGATCCCAGCTTTTGTTAATCGCAAACGTGGGAATGTGGATAAGAAACAGAGACAGAAACTTGGAACTTCATGTCAGTTCTAG 2097 0.4192 MMWKRDTTNSHYHFHPISAPPYTAVPLCLPSPLFRVDYHSLWKKLFFTTSSSSIQITRFHFSYMYPDSLHAEMAVATFKGPPSECCGNKKMERKPSGRRRVYVQTETGCVLGLELDRSDNAHTVKRKLQVAFNVPIEESSLICGDMVLKNDLSVVRNDSPLLLTRNFLYRSSSTPCLSPTATDLQQRDQSGPIEIIGCSDIFSGTKQLVKDIMMGIKVGIEPIPIQSGLGGAYYFRNSHGENVAIVKPTDEVPYAPNNPKGFVGKALGQPGLKRSVRVGETGFREVAAYLLDHNHFANVPCTALVKVRHSIFNVNDRVNGNMHHNKAQISKIASLQQFIPHDFDASDHGTSSFPVAAVHRIGILDIRILNTDRHAGNLLVRKLEGLGRFDQVELVPIDHGLCLPESLEDPYFEWIHWPHASIPFSEDELNYIYHLDPFRDSELLRRELPMIREACLRVLVLCTVFLKEAATFGFCLAEIGEMMSREFLGHDEEPSELELICIEAKKLLNEEEISSFDAEIGDRDVTLFQLDCEDQDLDFTGNIEETMTVMPPFHLAAKCGNTRNPLFKLEESVLEEESGNEGELTFGADEYTDTVGNWMPNISKLSLSMKNTRFGEKSWKHLGVKQKSSFLAGTSSRNMSVNELAVNSTFVKLTDMDEEKWNQFLENFQRLLIPAFVNRKRGNVDKKQRQKLGTSCQF 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0548 698 SUPERFAMILY Ubiquitin-like 98 154 IPR029071 -
Lal18g0548 698 Pfam Phosphatidylinositol 3- and 4-kinase 229 478 IPR000403 -
Lal18g0548 698 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE 66 698 - -
Lal18g0548 698 CDD Ubl_ubiquitin_like 101 163 - -
Lal18g0548 698 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 66 698 IPR044571 -
Lal18g0548 698 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 219 517 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0548 Lal-Chr18 4631472 4634953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0548 69 698 Acyl Lipid Metabolism Gene Families AT1G26270 62.264 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0548 - - gmx:100792780 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0548 18 4631472 4634953 Lal18g0548 18 4631472 4634953 ECH
Lal18g0548 18 4631472 4634953 Lal6g0755 6 5030439 5032367 LSH