Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0489 ATGGGTGATTTGCGTAGGAGGGAGAGATGGTTGGTTGATGTTGAATTATGTTTGTGGTGGCTAATTTTTGGCAGATGGGAAATGAGACTAGAAAGTGCAGCACTAAGGTTGGGTTTGATGGGAAACATATGCTTGTCATTCTTATTTTTTCCGGTTGCACGTGGCTCTTCGGTTCTGCCATTGTTTGGACTTACTTCAGAGAGTAGTATCAAGTACCATATTTGGCTCGGACACACTCTAATGATATTGTTAACTTCTCATGGCCTTTGTTACATTATCTATTGGGCACTTACCAATCAAATTTCTCAGATGCTGAAATGGAACACAACTGGGGCAGCAAATATTGCAGGAGAGCTAGCTTTGATTTTTGGTTTGTTGATGTGGATTGCAACCACCCAACGCATTAGACGAAAAATGTTTGAGCTCTTCTTTTACACTCACAATCTCTACATCCTCTTCATAATGTTCTTCATCTTCCACATTGGCATTTCCTATGCCTGCATTATGCTCCCTGGTTTCTACCTCTTCTTGGTTGATCGTTACCTAAGGTTTCTACAGTCAAGACACCAAGTTCGCCTTATTTCTGCTCGTGTTTTGCCTTGTGAAACTGTTGAACTCAATTTCTCTAAGAGTCATGGGTTAACTTATAATCCAACAAGTATTATGTTCATAAATATACCAAGTATATCCAAGCTACAGTGGCATCCATTTTCTGTTACTTCTAATAGTAACTTGGAGCAAGACAAGATAAGTGTTGTCATTAAAAGTGAAGGAACTTGGACAAAAAATCTCTACAAGCTTCTTTCATCTCCCTCTACAATAGATCGCCTTGGTGTATCTGTTGAAGGCCCTTATGGACCTGCATCAACTAATTACCTAAGAAAATCTTCAAGTCTCTCAATGATAGACTTGATCCTTCCAATTTCTACCATCCCTTATGATATTTCTAATATGAAACTACAAATTGAGGCCTATATTACCAAAGACAAGGAGCCTCTATTGAATATCCAAACTTACCTTCAAACCAAATGGTTCAAGCCAAATCCAACTGATGCGCCTATATATGCTATACTCGGTTCAAATGGTTGGCTCTGGCTTGGAGCTATAATTTCAACTTCCTTCATCATATTCCTTATCATAATTGGAATCTTTATCCGTTACTACATTTTTCCTATAGAACATAACTCAAACAACATATTCTCATCTCCCTTGAGGTCTTTTCTTCACATGCTAATAATATGTGTGTCCATAATCATAGTTGCTAGTGTAGCTTTTCTTTTGAACAAGAAACACGGTGCTAAAGAAGAAAAGAAGATTCAAGACTTGGAAGGGTCACCACCAACAACATCATCAAGCTCAACGAGTTCTAATACAGATATAGAATTAGAAAGCCTTCCATTCGAGTCCTTTGTTCAAGTTACCAATGTGCATTATGGTATAAGACCAAATCTAAAAAGACTGCTATTTGAAATCCAAGGGTCAAGTGTGGGAGTTCTTGCAGCAGGACCCAAGAAAATGAGGCATGAGGTTGCAGCCATTTGCTCATCTGGTTTAGCTAACAATCTCCATTTTGAGTCCATTAGCTTTAGTTGGTGA 1596 0.3847 MGDLRRRERWLVDVELCLWWLIFGRWEMRLESAALRLGLMGNICLSFLFFPVARGSSVLPLFGLTSESSIKYHIWLGHTLMILLTSHGLCYIIYWALTNQISQMLKWNTTGAANIAGELALIFGLLMWIATTQRIRRKMFELFFYTHNLYILFIMFFIFHIGISYACIMLPGFYLFLVDRYLRFLQSRHQVRLISARVLPCETVELNFSKSHGLTYNPTSIMFINIPSISKLQWHPFSVTSNSNLEQDKISVVIKSEGTWTKNLYKLLSSPSTIDRLGVSVEGPYGPASTNYLRKSSSLSMIDLILPISTIPYDISNMKLQIEAYITKDKEPLLNIQTYLQTKWFKPNPTDAPIYAILGSNGWLWLGAIISTSFIIFLIIIGIFIRYYIFPIEHNSNNIFSSPLRSFLHMLIICVSIIIVASVAFLLNKKHGAKEEKKIQDLEGSPPTTSSSSTSSNTDIELESLPFESFVQVTNVHYGIRPNLKRLLFEIQGSSVGVLAAGPKKMRHEVAAICSSGLANNLHFESISFSW 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0489 531 SFLD Ferric reductase subgroup (FRE) 17 301 - -
Lal18g0489 531 Pfam FAD-binding domain 190 289 IPR013112 GO:0016491
Lal18g0489 531 Pfam Ferric reductase like transmembrane component 37 157 IPR013130 -
Lal18g0489 531 PRINTS Cytochrome B-245 heavy chain signature 115 138 IPR000778 GO:0016020|GO:0016491
Lal18g0489 531 PRINTS Cytochrome B-245 heavy chain signature 140 160 IPR000778 GO:0016020|GO:0016491
Lal18g0489 531 PRINTS Cytochrome B-245 heavy chain signature 492 510 IPR000778 GO:0016020|GO:0016491
Lal18g0489 531 CDD NOX_Duox_like_FAD_NADP 193 299 - -
Lal18g0489 531 MobiDBLite consensus disorder prediction 437 457 - -
Lal18g0489 531 SFLD Ferric Reductase Domain 17 302 - -
Lal18g0489 531 PANTHER FERRIC REDUCTION OXIDASE 2 20 292 - -
Lal18g0489 531 PANTHER FERRIC REDUCTION OXIDASE 2 294 530 - -
Lal18g0489 531 MobiDBLite consensus disorder prediction 443 457 - -
Lal18g0489 531 Pfam Ferric reductase NAD binding domain 293 515 IPR013121 GO:0016491
Lal18g0489 531 PANTHER NADPH OXIDASE 20 292 - -
Lal18g0489 531 PANTHER NADPH OXIDASE 294 530 - -
Lal18g0489 531 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 186 291 IPR017927 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0489 Lal-Chr18 4049796 4052423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0489 26 531 Miscellaneous Gene Families AT1G01580 55.596 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0489 K00521 - gmx:100790114 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0489 18 4049796 4052423 Lal18g0489 18 4049796 4052423 ECH
Lal22g0867 22 6672387 6676908 Lal18g0489 18 4049796 4052423 LSH