Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0432 ATGTCTCAAATGGCAACCAAACAAGGTGATCAACAAACTCCCCTTGGAGACACCCTCAAGTACAAGACATGGGTTCTAAGAGTCTTGATTCACTGTGATGGCTGCAAAAAGAAAGTCAAGAAAGTTCTTCATGGAATTGATGGGGTTTATACAACAGATGTTGATTCTCAGCAGCATAAGGTTACAGTCACTGGTAACGTTGAGGCTGAGACTCTCATCAAGAAGCTTGAAAGAACAGGCAAATTTGCAGAGCTTTGGCCAGAGATTAAGCCTCCTCAGAAGAAAGATAATAATAATAATAATAATAATTCAGCAAAATCCAAGGGTAGTGACAATAATAATAAGATGGATAAAAAAGAAGACAATAAGAAGAAGAATAATGAACCTGTTGGAGATGCTAGTAATAATTCCAATGATGGTTGCATAGACATTCCTGATGAAGAAGAATCAGACAAAGAAGACCATAATGATGAATGCAAGGATATCCCTGGCGGCGGCGGCAGTGGTGGTGGTGATAGTAGTGAAGGTGGTAAAAAGAAGAAAAAGAAAAAGAAGAAGAACAAGGGTAATGGAAATGATGATTCTGCTCCTCCAAATAATGGAGTAGTAGGAGGAGGAGGAAAAGAAGAAGAAAGTAGTAAAGTTGATGCAGGACAAGTTCCTTCAAACAAGGCCATTTCAGTGGCTTCTAGAGAAATTATTGGTCCACCAATTCATCAACATGCTTATCCATACCCACAACAAATGTACTATTCACTTCCACTTCCTAATCAACCATATGGTTTAAGCTATAACACTTCATATCCTGCTTCTAGTGCTTCATATTATGTTGATGCTCCTATGCATGCTTATAATATTCCATACCCTCACTTGCCTCCACCTCCTCCACCATCTCATATAATCAACCACTATGGTGATGATAATGATGCTGGATATGAAGGTGGATGCTCCATTATGTGA 960 0.3896 MSQMATKQGDQQTPLGDTLKYKTWVLRVLIHCDGCKKKVKKVLHGIDGVYTTDVDSQQHKVTVTGNVEAETLIKKLERTGKFAELWPEIKPPQKKDNNNNNNNSAKSKGSDNNNKMDKKEDNKKKNNEPVGDASNNSNDGCIDIPDEEESDKEDHNDECKDIPGGGGSGGGDSSEGGKKKKKKKKKNKGNGNDDSAPPNNGVVGGGGKEEESSKVDAGQVPSNKAISVASREIIGPPIHQHAYPYPQQMYYSLPLPNQPYGLSYNTSYPASSASYYVDAPMHAYNIPYPHLPPPPPPSHIINHYGDDNDAGYEGGCSIM 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0432 319 SUPERFAMILY HMA, heavy metal-associated domain 21 87 IPR036163 GO:0046872
Lal18g0432 319 MobiDBLite consensus disorder prediction 84 222 - -
Lal18g0432 319 CDD HMA 25 81 IPR006121 GO:0046872
Lal18g0432 319 Gene3D - 19 83 - -
Lal18g0432 319 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 9 319 - -
Lal18g0432 319 ProSiteProfiles Heavy-metal-associated domain profile. 30 85 IPR006121 GO:0046872
Lal18g0432 319 MobiDBLite consensus disorder prediction 111 128 - -
Lal18g0432 319 MobiDBLite consensus disorder prediction 93 110 - -
Lal18g0432 319 Pfam Heavy-metal-associated domain 27 81 IPR006121 GO:0046872
Lal18g0432 319 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 9 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0432 Lal-Chr18 3610368 3612398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0432 - - gmx:100791626 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0432 18 3610368 3612398 Lal18g0432 18 3610368 3612398 ECH
Lal3g1337 3 19173238 19175309 Lal18g0432 18 3610368 3612398 LSH