Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0411 ATGACGAGTCTAACCCCATTTTGTTCAATAACCAGATTATTAATCACCCAAAATCAACTTCATCATAACTTTCCACTATTCAATTCCATAACACTGAAACCAAACAGAGTCTTAACAAAAACAATTCAATTATCATCATCTTCCTCAAACAATAATCTATACTCCGCTCAGAAATTTGACCTAACTGCCACAAACGTTGACCTCGTTCTGGAAGATGTTCGTCCTTACTTAATTTCAGATGGTGGTAACGTTGATGTTGTCTCCGTTGAAGACGGCGTTATATCTCTTAAACTTGAAGGAGCGTGTGAAACTTGTCCAAGTTCAACTACTACCATGAAAATGGGAATTGAACGTGTTCTTAAGGAGAAATTCGGAGATGCTGTTAAGGATATTCGTCAAGTTTATGATCAAGAACCAACCGATACAACCGTTCAGGCAGTGAGTAATCATCTTGAGATATTGAGACCAGCCATTAAAAATTATGGAGGCAGCGTGGAAGTGTTATCAATTGAAGGTGGAGAGTGCCATGTGAAGTATGTTGGCCCTGACTCCATTGGATCTGGAATCAAAGCTGCTATCAAGGAAAAATTTCCAGATATTCTAAATGTTACCTTTTCTACATAG 624 0.3814 MTSLTPFCSITRLLITQNQLHHNFPLFNSITLKPNRVLTKTIQLSSSSSNNNLYSAQKFDLTATNVDLVLEDVRPYLISDGGNVDVVSVEDGVISLKLEGACETCPSSTTTMKMGIERVLKEKFGDAVKDIRQVYDQEPTDTTVQAVSNHLEILRPAIKNYGGSVEVLSIEGGECHVKYVGPDSIGSGIKAAIKEKFPDILNVTFST 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0411 207 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 42 206 - -
Lal18g0411 207 Pfam NifU-like domain 67 126 IPR001075 GO:0005506|GO:0016226|GO:0051536
Lal18g0411 207 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 42 206 - -
Lal18g0411 207 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 64 134 IPR034904 -
Lal18g0411 207 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 140 204 IPR034904 -
Lal18g0411 207 Gene3D - 142 205 IPR034904 -
Lal18g0411 207 Gene3D - 58 141 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0411 Lal-Chr18 3470484 3472486 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0411 K22074 - gmx:100527356 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0411 18 3470484 3472486 Lal18g0411 18 3470484 3472486 ECH