Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0403 ATGGCAATGGAAGATCAAACCTTAACTGAATGGCGCACTCACTGTGGTCCCTACCTTGGAGACATTTCTGCTCTCTGTTTTCTTCACTTTCCCTCTCCCAATCACTCTCTTCCTTTTCTACTCGCTGGTTTGGGTTCGGAGATTATGGTGTACGACTTAGATGAAGGGAAGGTTATGAGGTCGTTCTCTGTATTCCAAGGGATTCGTGTGCATGGAATCACATCGAGTTTCCTACACCCTTCCGTAATTGCGGTGTTTGGGGAAACACGAGTTAAACTATTTAGCTTCTCCTTTGATTCTGTTCCACACTTGACACCGATTCATTTGTTGCCAAAGTTCGGTCACTGGGTTTTGGATGTTTGCTTCCTCGAGGGATGCTTATCTGATTCCAATGTGGATGACCATTTTCTCGCCGTAGGATGTAGCGACAATTCAGTTCACATCTGGGATATCTCCAACTCTATCGCGGTTCTCAAGATCCAATCCCCAGTCCGGTGCCTTTTGTACTCAATGCGATTATGGGGTCAGAATCTGGAAGTTCTCCGTATTGCATCTGGTACAATATTTAACGAGATTATTGTCTGGAAAGTGGCTTCTCATCATGATAAATCTTCAAGACGTGGAGAAGACCACGGCCATCAGAGCAATTCATTCTCCATTTGCTGCCCACCAAAAGACCAACTGTACGAGGCTGTTCATATATGTAAACTTATTGGACATGAAGGCTCAATTTTCCGAATAGCATGGTCGACTTGTGGATCTAAACTGCTATCTGTCTCTGATGACCGTAGTGCACGTGTCTGGGCTGTTCCTATTGAAAGAGAAGATTCTTTATGCCACGACCCCGTTGCCCTAGTCTTATTTGGTCACAATGCTCGAGTTTGGGACTGCTGTATTTCTGATTTTTTGATTGTTACTGCCAGTGAGGATTGTACATGTCGTGTATGGGGAGTCAATGGTGAACAGCTTCAAATCATTAAGGATCACATAGGAAGAGGTATATGGAGATGTTTGTACGACCCAAATTTGTCAATTCTGATAACTGCTGGGTTTGACTCTGCTATTAAAGTGCATCGGCCTCATGTTCCTATGAAGGGCCTTGCAGCAGCACAAGGCTCCCCTGGCGAGACAGAGATGTTTTCCATTTGCATCCCTAATGTTTTGGAGCATAGTGGACTCACGGACAGCAAAAGTGAATATGTTCGTTGTCTGCGTTTTTCCTGTCAGGATACTCTTTACGCTTCTACCAATCATGGTTATCTCTACCATGCAAAATTATGTAGTACTGGAGGTGCTCAGTGGAATCAACTTTTCCAGGTCAGCAACAGGGCACCAATTATCTGTATGGATTTATTGTCTACGGATTCATTTGAACTTGAATGTGGTGCTGAGGATTGGATTGCTATTGGAGATGGTAAAGGAAATATGACAGTTATTGGAGTTGCTAATGTCAATTGTACTCCTACTGTGAGATCGAGCATTACCTGGCCAGCTGAAATGGAGAGACAGCTGTTGGGTGCCTATTGGTGCAAATCTGTGGGATGTAGGTATGTCTTCACCGCTGATCCTAGAGGAACGTTGAAACTCTGGAGGTTGCCTGAACCTTCAGAATCCAACCTTCACAGCTCCATGAGCAGTAACAGTGCATCAAATATAGCAGAATTTGTATCAAGTTATGGAATGCGAATAATGTGTTTGGATGCAAGCATGGAGGAAGAGGTCCTAGCATGTGGAGATGTACGTGGTAATATAGTTCTGTTCCCTTTGCTGAAGAATCTGGTTTTGGGAACATGTGTTACTCAAGAAGTGAAGATACCTCCTGTTAATCATTTCAAAGGAGTTCATGGGATTTCAAGTGTGTCCAGTGTTTCTGTGACTAAGTTTGGTTACAATCAGATTGAGATATGCTCAACCGGAGCAGATGGTTGTATATGCTATCTGGAATATGATAAAGATATGGAGAATTTGCAATTTACGGGGATGAAACAAGTGAAAGAATTGACTTTGATTGAACACGTTTCTGTCAATAACAACTCTGCTGATTCCTTGTCAAGCAGCTATGCAGCTGGTTTTGCATCAGTAGACTTCATAATATGGAACTTAGCTAATGAGAACAAGGTGATGAAAATTTCTTGTGGAGGATGGCGTCGTCCTCATTCCTATTATCTTGGTGACATACCAGAGATGAAAAACTGCTTTGCATTTGTCAAGGATGAAATGATACATATACATAGACACTGGATTCATGATAGAGATAGAAAGATATACCCTCAGAGTTTGCATATGCAATTCCATGGGAGAGAGATACATTCTTTATGCTTTATCTACGAAGATATGCTTCTTGGAGATAATTATAAGCATACTTTATTTTCTAAATCAAGTATTGGAAATTGGTCAACATCAAAATTGCTTGGTGAACATGTTGGAGGATCGGCTGTAAGATCAATTTGTTGTGTATCAAAATTATACACCATTTCATCATATACAAATGATGTTTCTGATGGGAAGGGTGACTTGAATGCTGCTGATGAGGAGAAAGATAATCCAACCTTACTGATATCAGTAGGTGCCAAGCGTGTCTTAACTTCTTGGGTACTAAAAAATAGGAGACAAGACAACAAATATGACTTCCTAACTGATCATCAGTACAATTCAAAAGAAGTTGATGAGTCAAGCTTGCTTGGTTCAATGACATTCCAGTGGCTTTCCACTGACATGCCAGCCAAATACTCTACCACACACAGATATCCAGTTAATGATGTAGAGAATGGTGTTGCTGAAAATGTTTCTAATAATGCTAAACCTCAACCGCACTTTTCTGAAAGGGGAATGATGAACTTGGTCAGAGATAAGTATGAGGATGACTGGAGATATCTTGCCGTCACTGCTTTTCTTGTTAAATGTGCTAGTTCCAGGATATCGGTCTGCTTTGTTGTTGTTGCTTGTTCAGATGCTACACTTATGTTACGGGCTTTAATTTTGCCCTTTCGCTTATGGTTCGATGTTGCTTTGCTGGTTCCTTTATTGGCACCTGTTTTGTCATTGCAGCATATCATCTTTCCCATACATAAGTCTTATAAAGAAAACATCCGAGTTGGAAATATTTACATTGTGATTAGTGGGTCCACTGATGGGAGTGTTGCTTTTTGGGACCTAACTGATAGTGTTGAAGCTTTTATGCGACGGGTTTCAGTTTATGATGTACAGAAGTTTTTTGATTGTCAGAAACGTCCACGCACTGGGAGAGGAAGCCAGGGTGGTAGATTGTGGAGATCTTTAAGGAGTGACTTGCGGAAGAAAAAACAAGACAGCGGTCTGGTCACCTCAAAATCCAAATCCAAAGACAAGACCAAAAGCATCAGTTGTGCTACACATGGGAGCTCTCCAACGCCTAAAGATTCTGAAGATAGCAAGATGGTTTGTTCTCAAGCCGTGGATACGGCTTCCCCTGAGTCAGAAATTAAGACTGATAATTCGTCAGTGGAAGTATGTGAAATACAGCCTCTACGCCATATGCAAAATATTCACCAGTCTGGGGTTAATTGTCTCCATGTTTCAGAGATAAAGGGTGGCCAGACTACTGACAGTTGTCACGTGTACAGTATAATTAGTGGGGGTGATGATCAAGCACTTAATCATCTTATAGTTGAATTTTCACTTAAATCAACAAATTTGGTGTCTGAACCTGAAAGTGAAAAGGATATCAATTATCGGATCAGATTCTTAAATCATGAAAAAATTCAGTCGGCCCACAGCTCTTCTGTGAAAGGTGTCTGGACTGATGGATCTTGGGTGTTTTCGACCGGACTTGATCAGCGGGTCCGATGCTGGCACCTTCGGGAGAGGAAACTAATTGAGCATGCACATCTAGTAGTTAGTGTGCCAGAGCCAGAAGCGCTATCTGCTAGAGCTTGTAACAGGAACCATTATCAGATTGCTGTTGCTGGAAGAGGGATGCAAATAGTTGAGTTTTCAGAATCCTGA 3984 0.4177 MAMEDQTLTEWRTHCGPYLGDISALCFLHFPSPNHSLPFLLAGLGSEIMVYDLDEGKVMRSFSVFQGIRVHGITSSFLHPSVIAVFGETRVKLFSFSFDSVPHLTPIHLLPKFGHWVLDVCFLEGCLSDSNVDDHFLAVGCSDNSVHIWDISNSIAVLKIQSPVRCLLYSMRLWGQNLEVLRIASGTIFNEIIVWKVASHHDKSSRRGEDHGHQSNSFSICCPPKDQLYEAVHICKLIGHEGSIFRIAWSTCGSKLLSVSDDRSARVWAVPIEREDSLCHDPVALVLFGHNARVWDCCISDFLIVTASEDCTCRVWGVNGEQLQIIKDHIGRGIWRCLYDPNLSILITAGFDSAIKVHRPHVPMKGLAAAQGSPGETEMFSICIPNVLEHSGLTDSKSEYVRCLRFSCQDTLYASTNHGYLYHAKLCSTGGAQWNQLFQVSNRAPIICMDLLSTDSFELECGAEDWIAIGDGKGNMTVIGVANVNCTPTVRSSITWPAEMERQLLGAYWCKSVGCRYVFTADPRGTLKLWRLPEPSESNLHSSMSSNSASNIAEFVSSYGMRIMCLDASMEEEVLACGDVRGNIVLFPLLKNLVLGTCVTQEVKIPPVNHFKGVHGISSVSSVSVTKFGYNQIEICSTGADGCICYLEYDKDMENLQFTGMKQVKELTLIEHVSVNNNSADSLSSSYAAGFASVDFIIWNLANENKVMKISCGGWRRPHSYYLGDIPEMKNCFAFVKDEMIHIHRHWIHDRDRKIYPQSLHMQFHGREIHSLCFIYEDMLLGDNYKHTLFSKSSIGNWSTSKLLGEHVGGSAVRSICCVSKLYTISSYTNDVSDGKGDLNAADEEKDNPTLLISVGAKRVLTSWVLKNRRQDNKYDFLTDHQYNSKEVDESSLLGSMTFQWLSTDMPAKYSTTHRYPVNDVENGVAENVSNNAKPQPHFSERGMMNLVRDKYEDDWRYLAVTAFLVKCASSRISVCFVVVACSDATLMLRALILPFRLWFDVALLVPLLAPVLSLQHIIFPIHKSYKENIRVGNIYIVISGSTDGSVAFWDLTDSVEAFMRRVSVYDVQKFFDCQKRPRTGRGSQGGRLWRSLRSDLRKKKQDSGLVTSKSKSKDKTKSISCATHGSSPTPKDSEDSKMVCSQAVDTASPESEIKTDNSSVEVCEIQPLRHMQNIHQSGVNCLHVSEIKGGQTTDSCHVYSIISGGDDQALNHLIVEFSLKSTNLVSEPESEKDINYRIRFLNHEKIQSAHSSSVKGVWTDGSWVFSTGLDQRVRCWHLRERKLIEHAHLVVSVPEPEALSARACNRNHYQIAVAGRGMQIVEFSES 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0403 1327 Gene3D - 1017 1309 IPR015943 GO:0005515
Lal18g0403 1327 Gene3D - 174 384 IPR015943 GO:0005515
Lal18g0403 1327 Gene3D - 385 693 IPR015943 GO:0005515
Lal18g0403 1327 ProSiteProfiles Trp-Asp (WD) repeats profile. 237 268 IPR001680 GO:0005515
Lal18g0403 1327 MobiDBLite consensus disorder prediction 1096 1119 - -
Lal18g0403 1327 Pfam WD domain, G-beta repeat 235 268 IPR001680 GO:0005515
Lal18g0403 1327 Pfam WD domain, G-beta repeat 114 150 IPR001680 GO:0005515
Lal18g0403 1327 Pfam WD domain, G-beta repeat 288 316 IPR001680 GO:0005515
Lal18g0403 1327 Gene3D - 3 173 IPR015943 GO:0005515
Lal18g0403 1327 SUPERFAMILY WD40 repeat-like 15 360 IPR036322 GO:0005515
Lal18g0403 1327 ProSiteProfiles Trp-Asp (WD) repeats profile. 133 159 IPR001680 GO:0005515
Lal18g0403 1327 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 287 596 IPR011047 -
Lal18g0403 1327 ProSiteProfiles Trp-Asp (WD) repeats profile. 1038 1060 IPR001680 GO:0005515
Lal18g0403 1327 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 237 268 - -
Lal18g0403 1327 SUPERFAMILY WD40 repeat-like 510 1287 IPR036322 GO:0005515
Lal18g0403 1327 MobiDBLite consensus disorder prediction 1120 1159 - -
Lal18g0403 1327 SMART WD40_4 548 588 IPR001680 GO:0005515
Lal18g0403 1327 SMART WD40_4 280 317 IPR001680 GO:0005515
Lal18g0403 1327 SMART WD40_4 319 359 IPR001680 GO:0005515
Lal18g0403 1327 SMART WD40_4 230 269 IPR001680 GO:0005515
Lal18g0403 1327 SMART WD40_4 487 531 IPR001680 GO:0005515
Lal18g0403 1327 SMART WD40_4 604 648 IPR001680 GO:0005515
Lal18g0403 1327 SMART WD40_4 1013 1051 IPR001680 GO:0005515
Lal18g0403 1327 SMART WD40_4 1241 1278 IPR001680 GO:0005515
Lal18g0403 1327 SMART WD40_4 103 150 IPR001680 GO:0005515
Lal18g0403 1327 PANTHER WD REPEAT PROTEIN 15 1325 - -
Lal18g0403 1327 MobiDBLite consensus disorder prediction 1096 1159 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0403 K24737 - gmx:100780968 2075.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0403 18 3413122 3424513 Lal18g0403 18 3413122 3424513 ECH