Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0400 ATGGGAATCACTTCGACAATGATGACTACACAGCATGTGCTGACCTACATGTACCTTCTAGTTTACATTTCACTTTCGTCAGGGTGGGTCCTCTCCACATTGTACTTTAATTTTCCATTTCCAATAACACTCACCATGATCCACATGGCCTTTTCTGGAGCAGTGGCCTTTGTGCTTATTCGTGTTCTGAAGGTTGTATCACCAGTTAAAATGACGTTACACATATATGCAACTTGTGTGGTTCCTATAAGCGCCTTCTTTGCAGCAAGTCTGTGGTTTGGAAACACTGCTTATTTGTATATTTCTGTGGCCTTCATCCAGATGCTTAAAGCCCTGATGCCGGTGGCAACATTTCTCACGGCTGTTAGTTGGGGAACTGAGAAATTAAGGTGTGACGTGTTCTGGAACATGATGCTGATCAGTGTTGGAGTTGTTGTTTCCTCCTATGGGGAAATTCATTTTAATGTGATCGGTACAGTTTATCAGGTTACAGGAATAGTTGCTGAAGCATTGAGGCTGGTCTTAACTCAAGTTCTTCTTCAAACAAAGGGCTTGACACTAAACCCTATAACCAGCTTGTATTACATAGCACCCTGCAGCTTTGTATTTCTCTCTGTCCCCTGGTATATCCTTGAGAAGCCTGAGATGGAAGCTCCACATATGCAGTTTAACTTTTGGATATTTTTTTCAAATGCTCTTTGTGCTTTAGCATTGAATCTTGCAACATTTTTAGTGATTGGTAGAAGTGGGGCAGTAACTATTCGAGTTGCTGGCGTTTTGAAAGACTGGATACTTATCACTCTTTCAACTGTACTATTTCCTGAATCAAAGATTACCAGACTTAATATTATTGGCTATGCTATAGCTTTAATTGGTGTTGTTTTTTACAACTACTTGAAGCTCAGGGATGCTCCTATACCCCAACCTCCTATACCAAGTATCCAAGAGGAATCAGCAAAGGAGCTGCTGCCGGAGAAAAAGTTAGACGATGATGTGAATATCAATGAGGAGTGGAACAATTCTGTTTATTATACTAATTTTGATGAAGAAGCGCCTTTAATGGCTTCATCACGAAAATCAAATCTTGGAAGAAAGCCAGCTTAG 1104 0.4049 MGITSTMMTTQHVLTYMYLLVYISLSSGWVLSTLYFNFPFPITLTMIHMAFSGAVAFVLIRVLKVVSPVKMTLHIYATCVVPISAFFAASLWFGNTAYLYISVAFIQMLKALMPVATFLTAVSWGTEKLRCDVFWNMMLISVGVVVSSYGEIHFNVIGTVYQVTGIVAEALRLVLTQVLLQTKGLTLNPITSLYYIAPCSFVFLSVPWYILEKPEMEAPHMQFNFWIFFSNALCALALNLATFLVIGRSGAVTIRVAGVLKDWILITLSTVLFPESKITRLNIIGYAIALIGVVFYNYLKLRDAPIPQPPIPSIQEESAKELLPEKKLDDDVNINEEWNNSVYYTNFDEEAPLMASSRKSNLGRKPA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0400 367 Pfam Triose-phosphate Transporter family 34 297 IPR004853 -
Lal18g0400 367 PANTHER SOLUTE CARRIER FAMILY 35 1 346 - -
Lal18g0400 367 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0400 Lal-Chr18 3389270 3393407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0400 5 364 Organic Solute Cotransporters AT3G17430 71.935 7.69e-178 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0400 - - gmx:100779373 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0400 18 3389270 3393407 Lal18g0400 18 3389270 3393407 ECH
Lal5g0213 5 1835018 1840005 Lal18g0400 18 3389270 3393407 LSH