Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0383 ATGGCAAGACTTGTTACACTTCAACACAACCAACTACCTTTTTCTCCCTTAGCTTCTTCTCTTTCTGATTTCAGTGGTACCAGACTTCATACTCAACTTCAGGTGCAAAAAATGGTAGTGAAAAAGGGATATGAGATGATCATTTTCCTTATGAGAGTGACAAGTCAATTGAAGAAAAAATCATGGCAGCCAAAAGGGTCTTTTTATGTCTCAGCATCAAGCACCAAAAAAGTTCTCATAATGGGAGGCACTAGGTTTATTGGTGTGTTTTTGTCTAGGCTCCTTGTGAAAGAGGGTCACCAGGTGACTTTATTTACAAGAGGAAAAGCACCTATCAGTCAACAATTGCCAGGTGAATCAGACAGTGATTATGCTGATTTTTCTTCCAAGATCTTGCATTTGAAAGGAGACAGACAGGACTTTGAATTTGTAAAATCGAGTCTCTCAGCAGAAGGGTTCGATGTTGTTTATGACATAAACGGGAGAGAGGCGGTAGAAGTTGAGCCCATAGTGGATGCTCTACCTAATCTGGAACAGTACATTTACTGTTCTTCTGCTGGTGTCTATCTCAAATCTGATCTATTACCTCACACTGAGACCGATGCGGTTGATCCTAAGAGTAGACACAAGGGAAAGCTTGAGACAGAGAGCTTGCTGCAATCAAAGGGTGTTAATTGGACTTCAATAAGGCCAGTCTACATCTATGGACCCTTGAACTACAACCCTGTTGAAGAGTGGTTCTTCCACAGATTGAAAGCGGGTAGACCAATTCCAATTCCAAGCTCGGGAATACAGATAACACAACTTGGTCATGTTAAGGATCTGGCAAGAGTTTTTGTTCAGGTCCTTGGCAATGAAAAGGCCAGCAAGGAAATATTCAACATTTCAGGAGACAAGTATGTAACTTTTGATGGATTAGCAAGAGCATGTGCTAAGGCTGGTGGGTTTCCAGAGCCAGAGCTCGTTCACTACAACCCTAAAGATTTTGATTTTGGGAAAAAGAAGTCATTTCCATTCCGTGACCAGCATTTCTTTGCATCAATTGAGAAGGCAAAGAGTGTGCTTGGGTGGGAACCAGAGTTTGGTCTTGTAGAAGGTCTTGCAGACTCATATAACCTAGACTTTGGCCGAGGAACTTTTCGGAAAGCGGCTGATTTCGAAACAGATGACATAATTCTTGGCAAGAAGAGCCTTGTTAGTGTATGA 1206 0.4187 MARLVTLQHNQLPFSPLASSLSDFSGTRLHTQLQVQKMVVKKGYEMIIFLMRVTSQLKKKSWQPKGSFYVSASSTKKVLIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDSDYADFSSKILHLKGDRQDFEFVKSSLSAEGFDVVYDINGREAVEVEPIVDALPNLEQYIYCSSAGVYLKSDLLPHTETDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGIQITQLGHVKDLARVFVQVLGNEKASKEIFNISGDKYVTFDGLARACAKAGGFPEPELVHYNPKDFDFGKKKSFPFRDQHFFASIEKAKSVLGWEPEFGLVEGLADSYNLDFGRGTFRKAADFETDDIILGKKSLVSV 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0383 401 PANTHER UDP-GLUCOSE 4-EPIMERASE 73 393 - -
Lal18g0383 401 CDD SDR_a1 76 329 - -
Lal18g0383 401 Pfam NAD dependent epimerase/dehydratase family 78 295 IPR001509 -
Lal18g0383 401 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 76 372 IPR036291 -
Lal18g0383 401 Gene3D - 73 373 - -
Lal18g0383 401 PANTHER UDP-GLUCOSE 4-EPIMERASE 73 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0383 Lal-Chr18 3274396 3277933 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0383 - - gmx:100799721 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0383 18 3274396 3277933 Lal18g0383 18 3274396 3277933 ECH