Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0381 ATGGTTAATGCAACTATGACACTTGGTTTTGTGGCTCTACCCATCACTTCTTCTCATTTCCTCATTCCCACTTTATCTTCTTCCTATTCTCCCACTTCCCATTCAATTAAAGCTTTTGCAGTTCCAAGGAGGAAAGCAATATCTTTGATTTTATCAAGTTACCTTCTCCCTGAAGTTGGTTTAGCTTTGGCTCAACAATCTCCAGTGTTCCGCGAATATGTTGACACATTTGATGGTTATTCATTCAATTACCCTGGGAACTGGATTCAAGTTCGAGGCTCCGGGGCTGACATTTTCTTCAGGGACCCTTATGTTCTTGATGAAAATTTATCTGTTGAAGTTTCTTCACCTTCATCTTCCCAGTACAAGAGTGTTGAAGACTTGGGTCCGCCCCAAGCGGCTGGAAAGAAAGTGCTCAAGCAGTATCTAACCGAGTTTATGTCAACAAGACTAGGAGTTAGGCGCAAATCGAATATTCTTTCCACATCTTCAAGAGTTGCTGATGATGGCAAGTTATACTATCAAGTTGAGGTAAACATAAAATCATATGCTAATAACAATGAGCTTGCTGTTATGCCAGAAGACCGGGTGGTACGTCTAGAGTGGGATCGGCGATACCTATCTGTTCTCGGGGTTGAAAACAACCAACTGTATGAGTTGAGATTGCAGGTACCAGAAAATGTGTTTTCCCAGGAGGAAAATGATATTCGAAAAGTTATGGATTCATTTCGAGTGAACAAGATTGTTGCCTAG 753 0.413 MVNATMTLGFVALPITSSHFLIPTLSSSYSPTSHSIKAFAVPRRKAISLILSSYLLPEVGLALAQQSPVFREYVDTFDGYSFNYPGNWIQVRGSGADIFFRDPYVLDENLSVEVSSPSSSQYKSVEDLGPPQAAGKKVLKQYLTEFMSTRLGVRRKSNILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPEDRVVRLEWDRRYLSVLGVENNQLYELRLQVPENVFSQEENDIRKVMDSFRVNKIVA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0381 250 Pfam PsbP 70 245 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lal18g0381 250 SUPERFAMILY Mog1p/PsbP-like 71 245 IPR016123 -
Lal18g0381 250 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 64 245 - -
Lal18g0381 250 PANTHER - 33 249 - -
Lal18g0381 250 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC 33 249 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0381 - - gmx:100792664 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0381 18 3266898 3269240 Lal18g0381 18 3266898 3269240 ECH