Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0380 ATGATTACTATTAGCCTTATTAGCAATTGCACCATGAAACCATGTTCTAGGATCTTCATTGGTTACAAAAATTCATCCTTTCTTGCAAGATATCACCATTCTCTAACTATGTCTAACACTTTTACTTTCAATCTTGATCACTTTAACAATAGATGCATTCACCACTACCCTTTTGGCCTATTGAATAGTGGTAAAAACAATTTTCTTGGGTTACCATCTTTAAGGGTAACAACCTCAAGAAAGAGAGCAAAAGGTGATAATGATGTCTCTGCCAATATTGGTGGAGTGTCCTTCAAGGCACGCGAATTCTCAAGCTTCATTGAGACGCGTGTGAATGATAACAATGTTGAGAGGGTTTATGTTAAAGGTGGCATGAATGTGAAGCCAATAGTAGTGGAAAGAGATGATAAAGATGAGAATAATGCTGAAGAAAGAGAGAAAGAAGAAGAAGAAAAGTCGCGGTTACAATGTTGCGAGGAAGATGCAAAGATAGAGAATTCTGGTGATTTGAAGAATTTATCTCATGAGGCCAAGAACAAAGATGAAGAAGAGACAGAGGTGGAGAAAGAGGCATGGAAGTTGTTGCAAGAGGCACTTGTGACTTATTGTGACACCCCTGTGGGGACAGTGGCAGCAAATGATTCAGCTTCTCAGCAACAACAACAACAACAACAACAACCCTTGAATTATGATCAGGTCTTTATTCGAGATTTCGTCCCTTCGGCTCTCGCTTTCTTGCTCAAGGGTGAACATGAGATTGTCAAGAACTTTCTCCTTCGCACCTTGCAACTGCAGAATTTTACGTCCTTCCCCTATTCAATTGCATTGCAACAGAGTTGGGAGAAAACAGTGGACTGCCATAGCCCAGGGCAGGGATTGATGCCAGCTAGTTTCAAAGTTGAAACTGTAAAAGTTGATGATGAAGACAAAGAAGTTTTAGATCCTGATTTCGGAGAATCGGCTATTGGTCGTGTTGCGCCTGTAGATTCAGGATTGTGGTGGATCATTCTGCTGAGGGCTTATGGGAAGATCACTGGTGACTACAGCTTGCAAGAAAGGGTCGATGTTCAAACTGGCTTAAAAATGATCCTTAACTTGTGTTTAACCGATGGCTTCGATATGTTTCCTTCTATATTAGTAACCGATGGTTCTTGCATGATAGACAGGAGGATGGGCATACATGGTCATCCTCTTGAGATTCAAGCTTTATTTTACTCAGCTCTTCGCTGCTCCCGCGAGTTGCTTGTTGTAGATGAAAAATCGGAGACTCTTTTTGGAGAAGTTATAACCAGACTCAGTGCACTGTCATTCCACATTAGAGAATACTACTGGTTGGATATGAAAAAGGTGAATGAGATATACAGGTATAAAACAGAAGAGTACTCCTTAGAAGCAACTAACAAGTTCAACATCTATCCAGAACAAATTCCAATGTGGCTAATGGATTGGATTCCAGAGGATGGTGGATATTTTATTGGGAATCTGCAGCCAGCTCACATGGATTTCAGGTTTTTCATGCTCGGAAATCTTTGGTCTATTGTTTCTTCTTTGGGTACCCCAAGACAGAATGAGGCTATTTTGAATGTGATAGAAACAAAATGGGATGATCTTGTCGGAAACATGCCTATGAAGATATGTTATCCTGCCTTGGAGCATGAAGAATGGCGCATAATCACGGGCAGTGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCAGCCCTTCTATGGCAGTTCACACTGGCATGCATGAAAATGGGGAGAACTGAACTAGCCCAGAAAGCAGTTACTTTGGCTGAGCAAAGGCTGCCAAGGGACTCTTGGCCAGAATACTATGACACCCGAGCGGGAAGATTTATCGGAAAACAAGCGCGGTTTTATCAAACATGGACATTAGCTGGCTTCCTTGCATCTAAGATGCTTTTGAAGAATCCTGAAATGGCATCCTTGTTATGCTGTGATGAGGATTATGAGATTCTTGAGACATGTGTTTGTATACTTAACAAGAAGAGTGGCAGGACAAAATGCTCCCGTAATGCTGCCAAGTCGCAGATTCTAGTGTGA 2076 0.4167 MITISLISNCTMKPCSRIFIGYKNSSFLARYHHSLTMSNTFTFNLDHFNNRCIHHYPFGLLNSGKNNFLGLPSLRVTTSRKRAKGDNDVSANIGGVSFKAREFSSFIETRVNDNNVERVYVKGGMNVKPIVVERDDKDENNAEEREKEEEEKSRLQCCEEDAKIENSGDLKNLSHEAKNKDEEETEVEKEAWKLLQEALVTYCDTPVGTVAANDSASQQQQQQQQQPLNYDQVFIRDFVPSALAFLLKGEHEIVKNFLLRTLQLQNFTSFPYSIALQQSWEKTVDCHSPGQGLMPASFKVETVKVDDEDKEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYSLQERVDVQTGLKMILNLCLTDGFDMFPSILVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSRELLVVDEKSETLFGEVITRLSALSFHIREYYWLDMKKVNEIYRYKTEEYSLEATNKFNIYPEQIPMWLMDWIPEDGGYFIGNLQPAHMDFRFFMLGNLWSIVSSLGTPRQNEAILNVIETKWDDLVGNMPMKICYPALEHEEWRIITGSDPKNTPWSYHNGGSWPALLWQFTLACMKMGRTELAQKAVTLAEQRLPRDSWPEYYDTRAGRFIGKQARFYQTWTLAGFLASKMLLKNPEMASLLCCDEDYEILETCVCILNKKSGRTKCSRNAAKSQILV 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0380 691 Coils Coil 132 161 - -
Lal18g0380 691 MobiDBLite consensus disorder prediction 131 156 - -
Lal18g0380 691 Coils Coil 170 190 - -
Lal18g0380 691 Gene3D - 223 637 IPR012341 GO:0005975
Lal18g0380 691 SUPERFAMILY Six-hairpin glycosidases 191 641 IPR008928 GO:0005975
Lal18g0380 691 PANTHER ALKALINE/NEUTRAL INVERTASE 5 691 - -
Lal18g0380 691 Pfam Alkaline and neutral invertase 191 649 IPR024746 GO:0033926
Lal18g0380 691 PANTHER - 5 691 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0380 Lal-Chr18 3262627 3266342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0380 - - gmx:100812691 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0380 18 3262627 3266342 Lal18g0380 18 3262627 3266342 ECH
Lal18g0380 18 3262627 3266342 Lal24g0475 24 3343881 3352295 PCT
Lal24g0475 24 3343881 3352295 Lal18g0380 18 3262627 3266342 PCT