Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0379 ATGGCTTTTAAAACTGCTTTCTCTTCTCTATCACTTCCAAATTCAACTACCTTCTTATTCTCTTCTTCTTCTTCTTCCAATATCCGAAGACTCAAACCTATTTCACTTCCTTCTAGATTCTTCTTCAATTTCCAATCGGAACGCATCGTTTTGACGCCGAAAAAGCTTGTGGTGATGAAACCTTGCGCGGTGAGAATTGAAGAGAAGAATAGTAACGTTGCTGGTAGTGAAGGAGGAGAATGGGAGAAGGTTTCTGCGGTGTTGTTTGATATGGATGGTGTGCTTTGTAATAGTGAAGAAGCTTCTAGAAGAGCAGCGGTTGATGTGTTCGCTGAGATCGGTGTCTATGTCACCGTCGACGATTTTGTGCCGTTCACGGGAACCGGAGAAGCGAACTTTTTGGGGGGTGTGGCTTCTGTTAAGGGGGTTAAAGGATTTGACACTGAAGCTGCAAAAAAGAGGTTCTTTGAAATATATTTAGATAAGTATGCAAAACCAGATTCTGGAATCGGATTTCCAGGTGCCTTTGAACTCATTTCTCAGTGTAAAAACAAAGGCCTTAAAGTGGCTGTTGCATCTAGTGCTGATCGTATAAAGGTTGATGCAAATCTGGCTGCTGCTGCTTTACCATTGTCAATGTTTGATGTCATTGTGACTGCTGATGCTTTTGAAAACTTGAAACCGGCTCCCGATATATTCTTAGCCGCGTCAAGTTTTTTAAATGTTCCCCCCAGTGAGATGGTGTTTTTTCTATTAAACACCAAAAGTAATATCTTTTATTACCTTTACCCAGTGCATTGTTATAGAAGACGCGCTAGCTGGAGTGCAAGCTGCCAAAGCTGCCCAAATGAGGCAAGTATTGATCTCTGTTTCTTGCAAGAAAAATATTTACGTGTCATTTTCATTGTCGACAGATGCATAGCTGTCAGGACCACATTAACAGATGAGGTTTTAGAATCTGCTGGTCCAACACTTATCCGAGATGACATCGGAAATGTTTCACTTGATGATATTCTCAGTGGTGGCTCTGTTGGATATAATAAGAGTATGCAGGGCTTGGAAACTCTAAACAATTCTTCACAATCTTCATCTACTGTGCTTCTTGGAAAAACAGATGATGAAGATGGAAAATCTACCGGAGGTACTGATGGGGGAATTTTCTCAATTGAAGGGTTGCAGGGTTCTCGGCGAGATATACTGAGATTTGGAAGTCTGGGCATTGCTATCTCTTGCCTAGTCTTCACCTTAAGTAATTGGAAGGCAATGCAATATGCTTCCCCTAAAGCAGTTTGGAATCTCTTCTTTGGTGTTACCAAACCATCCTTGGAAGAGAAAGAAGGTAACTCGAGATATGATAGGATTCAGCAATTTGTGAACTACATAACTGATCTAGAAAGCAGGGGAAATGCTCAGATTGTTCCGGAATTTCCACCCAAACTTGATTGGCTGAATACAGCTCCGCTTCAGTTTGGAAGGGACCTAAAAGGAAAAGTTGTTCTTCTGGATTTCTGGACTTATTGTTGTATAAACTGTATGCATGTGTTGCCTGACCTAGATTTTTTGGAGAAAAAATACAAAGATATGCCGTTCGTTGTTGTGGGTGTTCACTCTGCAAAATTTGATAACGAGAAAGATTCTGAAGCTATTCGCAATGCAGTTTTACGCTATGGCATTTCTCACCCTGTTGTCAATGATGGAGACATGTACCTTTGGCGGCAGTTGGGCATAAATTCATGGCCAACGTTTGCTATAATTGGCCCAAATGGTAAGCTCCTTGCACAACTTGCAGGAGAAGGTCGTAAAAAGGATCTTGATGATTTTGTGGAGGCAGCGCTTCTGTTTTATGGAAAACAGAACATGTTGGACAATACACCAATTACATTGAACTTGGAGAAAGACAATGATCCTCGCCTATTGACGTCTCCATTGAAGTTTCCTGGCAAGCTAGCTGTTGATGTCCTCAATAATAGGCTTTTCATTTCGGACAGCAACCATAACCGCATAGTTGTTACTGACCTCGATGGGAATTTTGTTGTACAAATTGGGAGCAGTGGGGAGGAAGGTTTGCAGGACGGTTCCTTTGATGATGCCACCTTCAACCGTCCTCAGGGCCTTGCTTATAATCCAAAGAAAAATATCCTTTATGTCGCAGACACCGAAAACCATGCTTTAAGGGAAATTGATTTTGTTGATGAGAAAGTGCGTACTCTTGCTGGAAATGGGACAAAGGGTTCTGATTATATTGGAGGAGGAAAAGGGGACACACAGCTTCTTAATTCCCCTTGGGATGTCTGCTTTCATCCAATTGAAGAAAAAGTTTATATTGCCATGGCTGGCCAACATCAGATTTGGGAGCATAATATATTGGATGGAAGTACAAGGACATTTAGTGGAGATGGTTATGAAAGAAATTTAAATGGATCAAGTTCTACAAGCACATCATTTGCACAACCTTCTGGTCTTTCATTGTCTCGAGATCTAGCTGAGATCTACGTAGCTGATAGTGAGAGTAGTTCCATTCGAGCCCTTAATCTGAAAACAGGAGGATCTCGGTTGCTAGCTGGTGGTGATCCAATATTCTCTGACAACTTGTTTAAGTTTGGTGACCAAGATGGAATAGGCTCTGAAGTACTTTTTCAACATCCATTAGGGGTTGTGTGTGCAAAGGATGGTGAAATTTATATCACAGATAGCTACAATCACAAGATCAAGAAGTTTGACCCAACTAGTAAAAGCGTTAGCACCATTGCAGGGACAGGAACAGCTGGTTTCAAGGATGGAACAGCTGTGACAGCTCAGCTTTCTGAACCATCAGGAATTGTTGAAGGGAACAATGGGAGACTATTCATAGCCGATACAAACAACAGCTTAATTCGATATCTAGATTTGAACAATGATGAGTATGCACTCAGTACCTTAGAGCTTAAAGATTTTCAGCCTCCTAAGCCCAAATTGAGATCTCTTAAACGTCTTAGGAGACGAACATCAGCTGACACAGAAACCATTAACATTGATGCCATTTCATCCAATGAGGGAAACTTGTCTATTGAAATATCATTACCAAATGAATATCATTTCTCGAAGGAAGCACACAGTAGATTTAGTGTTGATATTGAGCCTGAAGATGCTGTGAATATTGATCCCCTAGATGGATTCCTTAGTCCAGAAGGATCTGCGACCCTTCACTTTAAGAGATCCTCTAACTCTGCTTCAATGACAAGAATTAATTGTAAGGTTTACTATTGCAAGGAAGATGAGGTTTGTTTGTACCAATCATTGCTGTTTCAAGTCCCTTTCCGAGAGGGAGCTCCGAACTCTACCGAAGCAGACGTCACCCTTGCACATTTTGTGAAGCCCAAAACAACCAGCAGCTCACTGCAGTCAGTTGCCCTGTGA 3396 0.4146 MAFKTAFSSLSLPNSTTFLFSSSSSSNIRRLKPISLPSRFFFNFQSERIVLTPKKLVVMKPCAVRIEEKNSNVAGSEGGEWEKVSAVLFDMDGVLCNSEEASRRAAVDVFAEIGVYVTVDDFVPFTGTGEANFLGGVASVKGVKGFDTEAAKKRFFEIYLDKYAKPDSGIGFPGAFELISQCKNKGLKVAVASSADRIKVDANLAAAALPLSMFDVIVTADAFENLKPAPDIFLAASSFLNVPPSEMVFFLLNTKSNIFYYLYPVHCYRRRASWSASCQSCPNEASIDLCFLQEKYLRVIFIVDRCIAVRTTLTDEVLESAGPTLIRDDIGNVSLDDILSGGSVGYNKSMQGLETLNNSSQSSSTVLLGKTDDEDGKSTGGTDGGIFSIEGLQGSRRDILRFGSLGIAISCLVFTLSNWKAMQYASPKAVWNLFFGVTKPSLEEKEGNSRYDRIQQFVNYITDLESRGNAQIVPEFPPKLDWLNTAPLQFGRDLKGKVVLLDFWTYCCINCMHVLPDLDFLEKKYKDMPFVVVGVHSAKFDNEKDSEAIRNAVLRYGISHPVVNDGDMYLWRQLGINSWPTFAIIGPNGKLLAQLAGEGRKKDLDDFVEAALLFYGKQNMLDNTPITLNLEKDNDPRLLTSPLKFPGKLAVDVLNNRLFISDSNHNRIVVTDLDGNFVVQIGSSGEEGLQDGSFDDATFNRPQGLAYNPKKNILYVADTENHALREIDFVDEKVRTLAGNGTKGSDYIGGGKGDTQLLNSPWDVCFHPIEEKVYIAMAGQHQIWEHNILDGSTRTFSGDGYERNLNGSSSTSTSFAQPSGLSLSRDLAEIYVADSESSSIRALNLKTGGSRLLAGGDPIFSDNLFKFGDQDGIGSEVLFQHPLGVVCAKDGEIYITDSYNHKIKKFDPTSKSVSTIAGTGTAGFKDGTAVTAQLSEPSGIVEGNNGRLFIADTNNSLIRYLDLNNDEYALSTLELKDFQPPKPKLRSLKRLRRRTSADTETINIDAISSNEGNLSIEISLPNEYHFSKEAHSRFSVDIEPEDAVNIDPLDGFLSPEGSATLHFKRSSNSASMTRINCKVYYCKEDEVCLYQSLLFQVPFREGAPNSTEADVTLAHFVKPKTTSSSLQSVAL 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0379 1131 Gene3D Putative phosphatase; domain 2 97 168 IPR023198 -
Lal18g0379 1131 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 84 250 - -
Lal18g0379 1131 CDD NHL-2_like 681 1022 IPR045302 -
Lal18g0379 1131 Gene3D - 86 250 IPR023214 -
Lal18g0379 1131 Pfam Haloacid dehalogenase-like hydrolase 87 249 IPR041492 -
Lal18g0379 1131 Pfam NHL repeat 879 906 IPR001258 GO:0005515
Lal18g0379 1131 Pfam NHL repeat 699 724 IPR001258 GO:0005515
Lal18g0379 1131 Gene3D - 615 786 IPR011042 -
Lal18g0379 1131 Gene3D - 861 961 IPR011042 -
Lal18g0379 1131 ProSiteProfiles NHL repeat profile. 879 909 IPR001258 GO:0005515
Lal18g0379 1131 CDD HAD_BPGM-like 86 250 - -
Lal18g0379 1131 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 84 95 IPR006439 -
Lal18g0379 1131 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 182 195 IPR006439 -
Lal18g0379 1131 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 214 230 IPR006439 -
Lal18g0379 1131 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 232 252 IPR006439 -
Lal18g0379 1131 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 190 1128 - -
Lal18g0379 1131 SUPERFAMILY HAD-like 43 250 IPR036412 -
Lal18g0379 1131 SMART LY_2 636 678 IPR000033 -
Lal18g0379 1131 SMART LY_2 755 794 IPR000033 -
Lal18g0379 1131 Pfam Thioredoxin-like 496 590 IPR012336 -
Lal18g0379 1131 ProSiteProfiles Thioredoxin domain profile. 467 613 IPR013766 -
Lal18g0379 1131 SFLD Haloacid Dehalogenase 84 250 - -
Lal18g0379 1131 SUPERFAMILY NHL repeat 637 966 - -
Lal18g0379 1131 Gene3D Glutaredoxin 445 614 - -
Lal18g0379 1131 SUPERFAMILY Thioredoxin-like 471 609 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0379 Lal-Chr18 3239022 3262345 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0379 - - gmx:100795843 1719.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0379 18 3239022 3262345 Lal18g0379 18 3239022 3262345 ECH