Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0317 ATGTTCTATTCTAAGAAACAATCTTTGAACTTTATTGCAGCTGAATATGCTAAGTTACCCTTAATCCAACCATATCTATTTCCTGGTTATAAACAATACACTGATGGCATCAATTTTGCATCAAGTGGAGCTGGGGCTTTAGTTGAAACCCATCAAGGAATTGTGATAGATCTAAACACTCAACTAAGTTATTTCAAGATTGTAAGCAATACACTTAAGCAGAAGCTAGGAAAAGCAGAAGCTAAAACTCTTTTGGCCAAAGCTTTTTACTTATTTAACATTGGAGGGAATGATTATTCAGTCTTCATGACAGAAAATTCAAGTGTCTCTACTTCATATACTCCTAAGAAATATGTGGATATGGTAGTTGGTAACCTCACAAATGTGATCAAAGGAATATACAAAATAGGTGGGAGGAAATTTGGGTTTCTTAATCAACCACCTTTTGGTTGTCTTCTATCTATCAAGGCACTTGAAAATGGAACTGAAAGTTCTTGCTTGGAAGAAGCATCATCATCACTAGCCAAACTACATAATAGTGTTCTTTCTGTGGAAACTCAAAAGTTAGAGAAAAAACTCAAAGGATTTAAATATTCATATTTTGATTACTTTGACATATCTTTTCAAGTAATAAACCACCCATCAAAATATGGATTTAAAGAAAGTGATGTTGCATGCTGTGGCAGTGGACCTAATAGGGAATATTACAGTTGTGGAGGTAAAAGAGCAGTGAAAGATTATGAATTGTGTGAGAATCCTAGTGAATATGTGTTCTTTGATTCTGTTCATCCTACTGAAAGAGTTTATCAGCTTTTTTCCCAGCTTATGTGGAGTGGAAATCAAAGTATTACAGGCCCACACAATCTGAAAACACTATTTGAAGAATAA 888 0.3423 MFYSKKQSLNFIAAEYAKLPLIQPYLFPGYKQYTDGINFASSGAGALVETHQGIVIDLNTQLSYFKIVSNTLKQKLGKAEAKTLLAKAFYLFNIGGNDYSVFMTENSSVSTSYTPKKYVDMVVGNLTNVIKGIYKIGGRKFGFLNQPPFGCLLSIKALENGTESSCLEEASSSLAKLHNSVLSVETQKLEKKLKGFKYSYFDYFDISFQVINHPSKYGFKESDVACCGSGPNREYYSCGGKRAVKDYELCENPSEYVFFDSVHPTERVYQLFSQLMWSGNQSITGPHNLKTLFEE 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0317 295 Gene3D SGNH hydrolase 3 282 IPR036514 -
Lal18g0317 295 SUPERFAMILY SGNH hydrolase 34 278 - -
Lal18g0317 295 CDD SGNH_plant_lipase_like 11 280 IPR035669 -
Lal18g0317 295 Pfam GDSL-like Lipase/Acylhydrolase 29 275 IPR001087 GO:0016788
Lal18g0317 295 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 294 - -
Lal18g0317 295 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 294 IPR044552 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0317 Lal-Chr18 2645223 2647246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0317 36 294 Acyl Lipid Metabolism Gene Families AT4G10950 25.856 1.04e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0317 - - gmx:100812893 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0317 18 2645223 2647246 Lal18g0317 18 2645223 2647246 ECH
Lal6g0579 6 3719950 3722781 Lal18g0317 18 2645223 2647246 LSH