Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0287 ATGGAAAAGTTAGTACCATTTGTCTTGGTCTGTGTTCTGAATATTGTCTTGAACTTCAAGACCATAGCATTAGGTGATGATAATGGAAGTAGTGGTATTGCATCATCAGAAAGTGCTAGTAGTAGTAGTACTTGTAAGAACACAAATTATCAAAATTTTCTTCCTCCACCATTTCAGAATATATCTTCCACAATATGCAAACCTGTTTGGCATACATATGAATTGAGGTACACCAGAATTGGTGATACAACAACTATTATATTATCTGCACCATACACACTTGGATGGGTAGGAATTGGATTTTCAAAAGATGGCATGATGGTTGGTTCAAGTGGTATGGTAGGATGGATTAATAAACATGGTCATGCAAATATAAAACAATACTATTTAAGGGGTAAGAAGCAATCAGAAGTTATAGCAGACAAAGGTGAACTCCCACTAAATAATGTGCCTGCTGCTGTAGCAACAAATGGAGCTGAAATTTATTTGGCATTTCAGCTTCAAACCACAACTTCATTTGGGAAACAACCAATTTTATTGGCTTTTGGTACTAAGATTCCACAGAACCACCATCTTTCAAAGCATGAGGACAAAACATCCATTGTCTTTGATTTTTCATCAGGTTCTACTGGTCCATCATCCAATGGGTTGATTAAGATGAGAAAGAGCCATGGAATAATTGGTATAATAGGGTGGGGTCTAATCCTACCTGTAGGTGCAATAATTGCTAGATACTTCAGGCATAAGGATCCACTTTGGTTCCATCTTCATTCAGTGATTCAACTTGTTGGATTTGCATTTGGACTTGGCACAGTTTTACTTGGATTACAACTATACTCCAAAATGCATGCTCATATTCCAGCTCATAGAGGCATAGGCATCTTTGTCCTTGTCCTGAGTATTCTTCAGATATTGGCATTATTCTTGAGGCCAAACAAGGATTCAAAAATCCGGAAGATGTGGAATTTATACCACAGTTGGTTTGGAAGAATGGCACTTATATTTGCAACAATGAACGTAGTGTTGGGAATGGAAGCTGCAGGGGCAGGGAATAATTGGAAGATAAGCTATGGATTCCTTGTTAGTATTATAATTGTTGCAGTAATCATTTTGGAAGTATTGGCATATTTGAAAAGGTTAGAGAATCGTTCTCTTCACAATTTCCATATGGATCCAGCTACAGAAGTTCCATTTCCAAGTAATAATAATCTACCGAAAGATAGCAGTTTGGAAAGTTGGACAACCCCAACTTTAGTTTCCTCACTTGAGCTTGAGGTTGAGCTTTTTTTTATTCATTGGGTTTCTTCTGCTGATTGGTCAGGAATATGTAAATCTATACAGATTGGAATAAACAAATATGAAGATGGTAATGGCATAAGCAAGGAAGGAGTACACAAAGTTTCTAATACCATTTTACATCCAAAAGGAAAACTGGAAAAAGGGAAAACTCAACAGACAGATGCATCTCAAAGTACTTTTCATTTCTTTGCAAGCAGCTTCTTTGGAAGTTTATCCAGTGGGGTAGATTTTAAAAGAAAAAGCCTGGCAGCACGTTCCTGCAAAGCACCTCCACATTTTAACCCACGTGATTGCAGTTCAGACTTCAACCTTTCCATACCAAGAACCTGTCAAAACCATAGCAAGGCTTCACCATCTCATCACATGACACAGGCTCAACAGCATTACCCAGTTTCACCTGATCAGTATCACTACTTTGTGGTCCAATAG 1728 0.3779 MEKLVPFVLVCVLNIVLNFKTIALGDDNGSSGIASSESASSSSTCKNTNYQNFLPPPFQNISSTICKPVWHTYELRYTRIGDTTTIILSAPYTLGWVGIGFSKDGMMVGSSGMVGWINKHGHANIKQYYLRGKKQSEVIADKGELPLNNVPAAVATNGAEIYLAFQLQTTTSFGKQPILLAFGTKIPQNHHLSKHEDKTSIVFDFSSGSTGPSSNGLIKMRKSHGIIGIIGWGLILPVGAIIARYFRHKDPLWFHLHSVIQLVGFAFGLGTVLLGLQLYSKMHAHIPAHRGIGIFVLVLSILQILALFLRPNKDSKIRKMWNLYHSWFGRMALIFATMNVVLGMEAAGAGNNWKISYGFLVSIIIVAVIILEVLAYLKRLENRSLHNFHMDPATEVPFPSNNNLPKDSSLESWTTPTLVSSLELEVELFFIHWVSSADWSGICKSIQIGINKYEDGNGISKEGVHKVSNTILHPKGKLEKGKTQQTDASQSTFHFFASSFFGSLSSGVDFKRKSLAARSCKAPPHFNPRDCSSDFNLSIPRTCQNHSKASPSHHMTQAQQHYPVSPDQYHYFVVQ 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0287 575 Pfam Eukaryotic cytochrome b561 242 345 IPR006593 -
Lal18g0287 575 PANTHER MEMBRANE PROTEIN-LIKE 16 385 - -
Lal18g0287 575 SMART DOMON_3 96 183 IPR005018 -
Lal18g0287 575 ProSiteProfiles DOMON domain profile. 71 183 IPR005018 -
Lal18g0287 575 CDD Cyt_b561_FRRS1_like 237 359 - -
Lal18g0287 575 Pfam DOMON domain 72 166 - -
Lal18g0287 575 Gene3D - 199 384 - -
Lal18g0287 575 SMART 561_7 223 344 IPR006593 -
Lal18g0287 575 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 16 385 - -
Lal18g0287 575 ProSiteProfiles Cytochrome b561 domain profile. 186 380 IPR006593 -
Lal18g0287 575 CDD DOMON_DOH 72 200 IPR045266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0287 Lal-Chr18 2344726 2349811 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0287 - - gmx:100792152 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0287 18 2344726 2349811 Lal18g0287 18 2344726 2349811 ECH
Lal18g0287 18 2344726 2349811 Lal18g0287 18 2344726 2349811 PCT