Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0282 ATGGTGAAGAAGGGAATGAAATCTGATATGAACCAATTATTTTCATTGCAAAAAAAGCACAACCATGTCTTCCTTAAGTTCACACTCTCATTTCTCTTAGTTGGTCTCACTTGTCGTCTCTTTATCTCAGATTCATTCAACTTCTCATCATTGTTTCAATCACATTCTTCTCCTCTTTCAAATGCAATAATAATAGCTCAGTCACCTTTGGTTTCTGTTCAGACTAATGATTCTGTTGAGTTCCAACGAAACCAGAGCCAACCCTTTTACAAAGTTAAATGTGATCTTTTTGTGGGAGAATGGGTACATGACCAATCTGGTCCATTGTACACTAATGAAAGCTGTCATGTGATCGAAGATCATCAAAACTGTATGAGAAATGGAAGAACTGATTCAGGGTACCTTTATTGGAGGTGGAATCCAAGGAGTTGTAATTTACCTAAGTTCAATGCAAAGAAATTTCTTGATCTTATGAGGAATAAATCGTGGGCTTTTATTGGCGATTCGATATCTCGTAACCATGTGCAATCGTTACTTTGCATTCTCTCACAGGTTCAAATCCTGGAATCAGCCTCTCCATTTGCAGAGGTAAGGCTAAGACTACACATGAGTTCAAATCCTGGAATCAGCCTCTCCGTTTGCAGAGGTAAGGCTAAGACTACGTACATTTTGTTGCTTAGTGACCATTACGACATGGGTTCAAATCCTGGAATCAGCCTCTCCGTTTGCAGAGGTAAGGCTAAGACTACATACATTTTGTTGCTTAGTGACCATTACAACATGGGTTCAAATCCTGGAATCAGCCTCTCCGTTTGCAGAGTGACCATTACGACATGGGTTCAAATCCTGGAATCAACCTCTCCGTTTGTAGAGGTGGAGCCAGCCATTGAGGTATACCATGATGAGGAGTATAGATCAAAAATATGGAAGTTTCCTTCTCACAACTTCACACTCTCAGTAATATGGGCACCTTTCCTTATCAAGGCAGATATATTTGAGGACATGAATGGAGTTTCCTCCTCGGAAATACAACTTTATCTTGACACTCTTGACAACAAATGGACCGACCGATACAACAATTTCGACTATGTCACAATTGCAGGTGGAAAATGGTTTCTCAAGACCGCGATATACCACGAAAACGCCACAATCACTGGCTGCCACTACTGCCCCGGGAAGAACTTAACCGAGCTTGGATTCGAACACGCCTACCGCAAAGCGCTTAAGCAGGTGTTTAACTTTATCACAAGCTCTAACCACAAAGCAATGGTTTTCTTCAGAACCACTACACCGGACCACTTCGAGAATGGTGAGTGGTTTAGTGGAGGCTATTGCAATAGGACAGTGCCCTTCAAAGAGAAGGACCAAGAAGATATAAAGGATGTAGATTCTATGATGAGAGGTATTGAAGTTGAAGAATTTAACAAGGGTCATGGTGCAAATTTGAAACTTTTGGACACAACATATATTTCACAATTAAGGCCTGATGGACATCCAGGACCATATAGAGAATTCTATCCTTTTGCAAAGGACATGAATGCTAAAGTTCAAAATGATTGTTTGCATTGGTGTTTGCCAGGACCTATTGATTCTTGGAATGACATAGTAATGGAAATGTTGATCAATAATGTCATATAA 1638 0.4029 MVKKGMKSDMNQLFSLQKKHNHVFLKFTLSFLLVGLTCRLFISDSFNFSSLFQSHSSPLSNAIIIAQSPLVSVQTNDSVEFQRNQSQPFYKVKCDLFVGEWVHDQSGPLYTNESCHVIEDHQNCMRNGRTDSGYLYWRWNPRSCNLPKFNAKKFLDLMRNKSWAFIGDSISRNHVQSLLCILSQVQILESASPFAEVRLRLHMSSNPGISLSVCRGKAKTTYILLLSDHYDMGSNPGISLSVCRGKAKTTYILLLSDHYNMGSNPGISLSVCRVTITTWVQILESTSPFVEVEPAIEVYHDEEYRSKIWKFPSHNFTLSVIWAPFLIKADIFEDMNGVSSSEIQLYLDTLDNKWTDRYNNFDYVTIAGGKWFLKTAIYHENATITGCHYCPGKNLTELGFEHAYRKALKQVFNFITSSNHKAMVFFRTTTPDHFENGEWFSGGYCNRTVPFKEKDQEDIKDVDSMMRGIEVEEFNKGHGANLKLLDTTYISQLRPDGHPGPYREFYPFAKDMNAKVQNDCLHWCLPGPIDSWNDIVMEMLINNVI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0282 545 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 295 541 IPR029962 GO:0016413
Lal18g0282 545 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 67 184 IPR029962 GO:0016413
Lal18g0282 545 Pfam PMR5 N terminal Domain 93 145 IPR025846 -
Lal18g0282 545 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 295 541 - -
Lal18g0282 545 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 67 184 - -
Lal18g0282 545 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 146 186 IPR026057 GO:0016740
Lal18g0282 545 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 292 539 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0282 Lal-Chr18 2323106 2327120 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0282 - - mtr:MTR_8g027900 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0282 18 2323106 2327120 Lal18g0282 18 2323106 2327120 ECH
Lal6g0652 6 4249683 4253510 Lal18g0282 18 2323106 2327120 LSH
Lal18g0282 18 2323106 2327120 Lal6g0652 6 4249683 4253510 PCT
Lal18g0282 18 2323106 2327120 Lal18g0282 18 2323106 2327120 PCT
Lal6g0652 6 4249683 4253510 Lal18g0282 18 2323106 2327120 PCT