Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0224 ATGGAGTCCAGCAATTGGATACCGAATCAAAGCACGGAACCCACTATGGATACAAGTGATTGGAGAGCTCAACTCATGCCTGATTCACGCCATAGAGTTGTCAACAAAATAATGGACACATTAAAAAAACATCTTCCTGTTTCTGGTCCAGAGGGATTACTTGAACTTCGGAAGATTGCTCAAAGGTTTGAAGAGAAGATTTATACTGCTGCAACAAGCCAGCAAGATTATCTACGGAAAATATCTTTGAAGATGCTTACAATGGAGACGAAATCTCAGAATACCATGGGAAACAATATGCCATCAAATCAAGTTGGCCCTAGCAATTTACCTCCTGATCAAGGACTTGTTATGCAGCCTCAAGTTCATAATCCTGGGCAGCAACAACCTGTTTCTTTGGCTAACCAGCCCCAGCCGCGTCAACAGATTCTGTCTCAAAACATTCAAAATAACATTGCACCTCAACCTAACCTTCCACCTGTATCTAGTCTAGCCCAGACTCCCAGCCAAAACACGGGCCAGAATTCCAACGCACAGAGTACACCTGGGCAGAATTCAGTGGGGGGCACTATAGGCCAGAATTCCAACATACAGAATATGTTTCCTGGTTCTCAGAGACAAATGCCAGGAAGGCAGCAGGTTCTTACCCAACAACAACAGCAGCAGTCAGAGAATCCACAGCAGTATCTTTTCCAACAGCAGCTTTTCAAGCATAAGCTACAAATGCAATCTCAGATGCAGCAACAACAACAGCAGAACCTTCTACAACCAAACCAGTTGCAATCTTCTCAACAATCAGTTATGCAAACATCATCTGTTCTGCAACCTTCCATGATCCAGGCATCTTCTCTATCAAGCCTTCAGCAGAACCAGCAGGCTAATAACGTTCAACAGTCAACACAGTCAATGCTTCATCAACATCCCCAAGTTATGAGGCACCAGCAGCAACAGACTTCTGCTGTTCATCAGCAACAAACATCAATGAACCAACAGCAGATGTTGCCTACACAACAGCAGCAGCAGCTTTTGGGGTCACAGACAAATGCAACAAATATGCAGCATGCTCAGATGCTTGGGGCACAGAACAATGTTGGGGATATACAGCAATCACAGAGGCTACTTTCACAGCAGAATAATTTTACAAACCTGCAACAGCGGCAGCAGCAACAACAACAGTTAATGAATCAGCAAAACAACCTAGGAAATATGCATCAGCAGCAGTTTGGAAATAATGCCCCTGGGTTACAGCAGCAACAGTTGCTTGGACCTGAATCTGGCAACCCAGGCATGCAAACAACCCATCAGTCTGCACACATGAAGGTCCCCATTGCACAACAATCACAGCAACACACAACTAATTTGTTACCACCTCAAGCGCAGCTGTCACAGACACAGAGTGCACCACAGCAATTGACGCCACAGATGAACACTCAGCCTGCACAGTTGCAACAGCAATATGGTTTGCAGCAGCAGCAGTCAAATTCCTTGCAACATGATATGCAGCAAAGACATCAATCATCAGGGTCCATGATTCAACAGCAGAACGCTCTTGATAAACAAAAACAGTTGTATCAATCTCAAAGGGCACTGCCAGAAACATCAACAACTTCTGTGGATTCTACAGCACAGACTTCACAATCAAGTGGAGCTGATTGGCAGGAAGAAGTTTACCAAAAGATACAAACCATGAAAGAAAGCTACTTGCCAGAGTTGACTGAAATGTACCAGAGAATTGCTACTAAACTTCAGCAGCATGAGTCTCTTCCCCAACAATCAAAGTCAGAGCAGCTTGACAGGGCGAGGGCATTTAGAACGATGTTGGAGCATATAATAGCATTCCTAAAGGTTCCCAAGAATAACATTTCTCCTAATTTCAAGGAAAAAATTGGATCATATGAGAAGCAAATTATAAATCTCATAAATGCAAATAAGCCTAAGAAAGGCATATCTTCACTACAGCCAGGACAGCTTCCCCCAGCTCATATGCACTCCATGTCACAGCCACAATCCCAAATTAGTCAAGTACAGCCTCATGAAACTCAAATAGACTCTCAGATGCAGCCAACAAATTTACAAGGTTCTGTAGCAACAATACAGCAGAATAATATGGCAAGCTTGCAACACAACTCTATGTCTGGTGTATCGACAGCGCAGCAGAATATGAATTTAATGCAACCTGGTACTAATTTTGATTCTGGACATGGAAATTCTATGAATTCCCTGCAGCGGGTCCCAGTGAGCTCCCTTCAACAAAACCCTGTTAGTTCTCCTCAACAGCCCAACATCAATTCCTTGTCGTCGCAAGGTGGAGTACATGGGATCCAACCAAATCTGAATACACTTCAGTCAAGTTCAACTATGCTTCAACACCAGCAACTGAAACATCAGCAAGAACAGCAGATACTGCAGAGTCAACAATTCAAACAGCATCAGCAGAGACAGTTGCTGCACAGGCAACAGATCCTGCAGCAGCAGCAACTACACCAGCCAGGAAAGCAACAACTGTCTGCACAGTTACAGACACATCAAATTCCCCAGCTTCACCAAATGAATGATATAAATGATATAAAAGCACAAAAAGGAATGGGCGTTAAGCCAGGAATCTTTCAGCAACATCTCACTTCTGGTCAACACTCAAATTATCCCCATCAACCGTTGAAACCAGGGGGTACATATCCTGTTTCTTCACCCCAACTCCTTCAAGCTGCATCTCCTCAGATTCTACAACACTCATCTCCCCAGGTTGACCAACAAAATCATCTCCCGAATTCAAAAAAAGTTGCAACTACTATGCAATCTTCCAACTCACCTTTTGTGGTGCCCACTCCTTCACCTCCCTTGGTTCCATCTCCTATGCCAGGAGATTCTGACAAGCCCATTCCTGGTTTTTCGTCAATATCAAATGCTGCTAATATTGTACATCAACAAACAGTGGGAGCAGCAGCAGCTCAATCCCTTGCCATTGGCACTCCTGGGATATCAGCCTCTCCATTACTGGCTGAGTTCAGTGGTCCAGATAATGCTTTAGCAGCAACTTCTGGGAAGTCAACTGTTACAGAGCAACCTATTGAACACCTAATTAGAGTGGTGAAATCAATGTCACATAAAAAATTAAGTGCCGCTGTCAGTGATATTGGTTCAGTTGTCAGCATGAATGATCGTATAGCAGGATCAGCTCCTGGTTCTGGATCCAGAGCTGCTGTTGGTGAGGATTTGGTTTCCATGACTAATTGTCGCCGTCAGGCTAGAAATTTCATCACCCAGGATGGTACCAATGGAAATAAGAGGATGAAGCGCTACATCAGTGCCATGCCCTTGAATGTTGTATCATCTGCTGGTAGCGTTAATGACAGTATCATAGAGACTTCTGAGCTAGAGTCAACTGCAACGTCCAGTATCAAAAAGCTAAAGACTGAGGCCAATCACACCCTTTTGGAAGAAATTAGGGAGATTAATAATCAACTTATTGATACAGTAGTAGAGATAAGTGATGAAGATGTTGATCCAACTGCAGCAGCAGCTGCTGCTGAAGGAGCAGAAGGGACCATTGTCAAATGTTCTTTCAGAGCTGTGGCTCTCAGTCCAACCTTGAAATCCCAGTATGCTTCAGTGCAGATGTCACCAATTCGACCCTTACGTTTGCTTGTTCCTGTAAATTATCCAAATTGCTCTCCCATACTCCTAGACAAATGTCCAGTTGACTCCAGCAAGGAGAATGAAAATCTTTCAGTGAAGGCAGAGTTAAGGCTTAGCATATCATTGCGTTCTTTATCACAGCCTATGTCCCTTGGGGAGATAGCTAAGACTTGGGATGTTTGTGCTCGCAGAGCTATTTCTGAGCATGCACAACAGAGTGGTGGAGGAACCTTCAGCTCCAAGTATGGGACTTGGGAGGATTGCTTTGATTGA 3909 0.4398 MESSNWIPNQSTEPTMDTSDWRAQLMPDSRHRVVNKIMDTLKKHLPVSGPEGLLELRKIAQRFEEKIYTAATSQQDYLRKISLKMLTMETKSQNTMGNNMPSNQVGPSNLPPDQGLVMQPQVHNPGQQQPVSLANQPQPRQQILSQNIQNNIAPQPNLPPVSSLAQTPSQNTGQNSNAQSTPGQNSVGGTIGQNSNIQNMFPGSQRQMPGRQQVLTQQQQQQSENPQQYLFQQQLFKHKLQMQSQMQQQQQQNLLQPNQLQSSQQSVMQTSSVLQPSMIQASSLSSLQQNQQANNVQQSTQSMLHQHPQVMRHQQQQTSAVHQQQTSMNQQQMLPTQQQQQLLGSQTNATNMQHAQMLGAQNNVGDIQQSQRLLSQQNNFTNLQQRQQQQQQLMNQQNNLGNMHQQQFGNNAPGLQQQQLLGPESGNPGMQTTHQSAHMKVPIAQQSQQHTTNLLPPQAQLSQTQSAPQQLTPQMNTQPAQLQQQYGLQQQQSNSLQHDMQQRHQSSGSMIQQQNALDKQKQLYQSQRALPETSTTSVDSTAQTSQSSGADWQEEVYQKIQTMKESYLPELTEMYQRIATKLQQHESLPQQSKSEQLDRARAFRTMLEHIIAFLKVPKNNISPNFKEKIGSYEKQIINLINANKPKKGISSLQPGQLPPAHMHSMSQPQSQISQVQPHETQIDSQMQPTNLQGSVATIQQNNMASLQHNSMSGVSTAQQNMNLMQPGTNFDSGHGNSMNSLQRVPVSSLQQNPVSSPQQPNINSLSSQGGVHGIQPNLNTLQSSSTMLQHQQLKHQQEQQILQSQQFKQHQQRQLLHRQQILQQQQLHQPGKQQLSAQLQTHQIPQLHQMNDINDIKAQKGMGVKPGIFQQHLTSGQHSNYPHQPLKPGGTYPVSSPQLLQAASPQILQHSSPQVDQQNHLPNSKKVATTMQSSNSPFVVPTPSPPLVPSPMPGDSDKPIPGFSSISNAANIVHQQTVGAAAAQSLAIGTPGISASPLLAEFSGPDNALAATSGKSTVTEQPIEHLIRVVKSMSHKKLSAAVSDIGSVVSMNDRIAGSAPGSGSRAAVGEDLVSMTNCRRQARNFITQDGTNGNKRMKRYISAMPLNVVSSAGSVNDSIIETSELESTATSSIKKLKTEANHTLLEEIREINNQLIDTVVEISDEDVDPTAAAAAAEGAEGTIVKCSFRAVALSPTLKSQYASVQMSPIRPLRLLVPVNYPNCSPILLDKCPVDSSKENENLSVKAELRLSISLRSLSQPMSLGEIAKTWDVCARRAISEHAQQSGGGTFSSKYGTWEDCFD 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0224 1302 MobiDBLite consensus disorder prediction 894 938 - -
Lal18g0224 1302 MobiDBLite consensus disorder prediction 93 139 - -
Lal18g0224 1302 MobiDBLite consensus disorder prediction 415 552 - -
Lal18g0224 1302 MobiDBLite consensus disorder prediction 120 139 - -
Lal18g0224 1302 Coils Coil 386 406 - -
Lal18g0224 1302 MobiDBLite consensus disorder prediction 93 110 - -
Lal18g0224 1302 MobiDBLite consensus disorder prediction 151 226 - -
Lal18g0224 1302 MobiDBLite consensus disorder prediction 874 951 - -
Lal18g0224 1302 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 1 1301 - -
Lal18g0224 1302 Pfam KIX domain 19 98 IPR036546 -
Lal18g0224 1302 SUPERFAMILY Kix domain of CBP (creb binding protein) 18 94 IPR036529 GO:0003712|GO:0006355
Lal18g0224 1302 Coils Coil 1145 1165 - -
Lal18g0224 1302 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 1 1301 IPR044661 GO:0003713|GO:0031490
Lal18g0224 1302 MobiDBLite consensus disorder prediction 660 683 - -
Lal18g0224 1302 Gene3D Coactivator CBP, KIX domain 20 98 IPR036529 GO:0003712|GO:0006355
Lal18g0224 1302 MobiDBLite consensus disorder prediction 647 683 - -
Lal18g0224 1302 MobiDBLite consensus disorder prediction 284 344 - -
Lal18g0224 1302 MobiDBLite consensus disorder prediction 747 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0224 Lal-Chr18 1852547 1861975 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0224 K14972 - gmx:100805336 1531.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0241 25 1668918 1679933 Lal18g0224 18 1852547 1861975 PCT
Lal18g0224 18 1852547 1861975 Lal25g0241 25 1668918 1679933 PCT