Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0216 ATGGCCCCAAGGTCAGGGAAAGGGAAATCAAATAAAGCTAAGGCAGAGAAGAAGAAAAAGGAAGAGAAAGCTGTGGCACCTTCTCTTGTTGACATAACTGTGGTCACTCCATATGATTCACACCTTGTCTTAAAGGGTATCTCTACTGATAAGATGCTTGATGTAAGGAGGTTATTGGCTGTGAAAGTGGAAACATGCCATTTTACAAATTATTCTTTATCTCATGAGGTTAAAGGTCAAAGATTAAATGAGAGAGTTGAAGTTGTTACCCTAAAGCCATGTGTTATAAGAATGGTTGAAGAGGAATACAAAGAGGAAGGTGATGCAATATCACACGTGCGGAGGGTGTTGGACATCATGGCTTGTACAACGAGATTCGGGAAGCCCAAACGGGGCTTATCAAGCCCAGAATCAAAGCCCAAGAAAAACGGAAAAGCCCAAAATGAGAAGAAGAGTAATGGGTCGTCGGAGAAGCCCGTATCAACGATATCGGAGAACGTAGGAATGGTGGCGATACACCCAACGCCGAAGTTGTCAGATTTCTACGAATTCTTCTCTTTCTCTCACCTCTCTCCTCCCATTCTATATTTGAAGAAATGTGAACTGAAGAATGAAGTTGATAAAGGCAAAGGAGATTATTTTCTGCTTCAGGTTAAGATCAGCAATGGGAAGGTAATAGAAGTGGTTGCTTCAAAGAAAGGGTTTTACTGTGTTGGAGGAAAGCACTCTCTGCAAAGCTACACTTTGGTTGATCTTTTGCAACAACTTAGCAGAGGTTTTGCTAATGCATATGGATCATTGATGAAAGCTTTTTTGGAACATAACAAGTTTGGGAATCTTCCATATGGATTCCGAGCAAATACATGGCTTGTCCCTCCTTCTGTTGCTGACTCTCCTTTGAACTTTACTGCCTTACCGGCTGAGGATGAAAACTGGGGTGGTAATGGTGGTGGCCATGGTAGAAACAGTGAACATGATCTTAGATCATGGGCAACAGATTTTGCAATATTGGCTTCTCTTCCTTGCAAAACCGAGGAGGAGAGGGTGGTCAGAGATAGAAAAGCTTTTCTGCTTCACAATCAATTTGTTGATACCTCAATATTTAAGGCTGTTGCAGCTATACAATATATGATGGAGTCCAAGTCAAATTTGAAGAAGGAATTGAATTCTACTCCAGGTTCTGTTTTGCATGAAGATCACGTAGGAGACTTATCCATTGTTGTCAAACGTGATATCGGAGATGGAACTAATAAGTATGATGCAATATCTAATGAACCAAGTCCGCACAAAGAGGATGCTCAGAAGAATTTAATCAAAGGGTTGAAGGCACAAGAAAATGTCATTGTTCATGATACTTCTTCTTTGGCTGTTGTCGTTGTTCACCACTGTGGATATACTGCAACAGTAAAGGTTGTTGGTAACTTGAACAAGAAGAAACTTAATGATCAAGATATTGAAATAGATGATCAGCCAGACGGAGGAGCGAATTCTCTTAACATCAACAGTTTGAGGCGACTGCTTCACAAGTCTGGAGTTGTACCATCAGAAGGGACTTTATCATCCATATCGAACTCTGATGACTTCGACGCTTCTGAGGATGTTGTTCGGAAAGTGGTCCAAGAATGCTTGGAAAAGATTAAGGAGGAGCCGGATGTTTCAAAAAGGTCTATTCGATGGGAACTTGTTTCCTGTTGGATGCAGCATCTACAAAAACAGGACACTTCAACTGATAGCTCTTCCACTAATAAAGAAGATGTAAATGACGTTGAGCAAGCTGTTAAAGGTCTTGGAAAACAATTCAAACTTTTGAAGAGAAGAGAAAAGAAACCAAGTAGTCAAGATAATACAGATTCTAGTTCTGGAAACATGAATGTGTGTACTGATAAAGTTGAGCCAAACAATGATGACTTAAGTAGCTCTACTGAATTGGAGAAGCTACTTTCTAAAGAAGCATTTTTGCGTCTCAAAGAATCTGGAACTGGTCTTCATCTAAAGTCAGTGAATGAGCTTATCAATATGGCACACAAGTTTTACGATGATGTTGCCTTGCCAAAGCTGGCTACAGACTTTGGATCACTTGAACTTTCTCCCGTTGATGGCCGTACACTAACTGATTTTATGCATTTAAGAGGCTTACAGATGCGATCTCTGGGTGAAGTGGTTAAACTCGCAGATAGTCTTCCACACATACAATCACTTGGTATTCATGAGATGATTACTCGAGCTTTCAAGCATCTGCTTAAAGCAGTTATTGCCTCTGTTGACAATGTGGCAGACTTTTCTCCGGTCATAGCATCAACACTAAATTTCTTACTCGGAGGGGGTAGTGGCCAGATTCCGGGTGATGGCCATAATCTTAGAATCCAGTGGTTACGCATATTTTTGGCCAAAAGATTTGGATGGACCCTGAACGATGAATTTCAACATTTGAGGAAGTTATCAATTCTCAGAGGGCTCTGTCACAAGGTTGGATTGGAACTATTCCCAAGAGATTATGACATGGAATCCCCCAAGCCCTTTGGAAAATATGATATTATTAGTCTGGTTCCTGTTTGCAAGTATGTAGGGTGTTCCTCAATAGATGGACGCAATTTATTGGAATCTTCCAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAATTATGGAACAAAGGCATTAGCAAAGATGATGGCTGTTTATGGTCCCTATCACCGTACTACAGCAAGTGCGTACAGTCTTCTTGCTGTGGTTCTCTACCACACTGGTGATTTTAATCAGGCTGCCATATACCAGCAAAAGGCTTTGGATATAAATGAGAGGGAGCTTGGACTTGACCATCCCGACACCATGAAAAGCTATGGGGATCTTTCTGTCTTTTATTATCGTCTGCAACACATTGAACTTGCTCTTAAGTATGTCAACCGTGCTCTATTCCTTCTTCATTTTACATGTGGGTTGTCTCATCCAAACACTGCTGCAACATATATAAATGTGGCTATGATGGAAGAGGGCATGGGAAATGTTCAAGTAGCGCTCAGATACTTACATGAAGCTCTTAAATGCAATAAAAGATTGTTAGGCGAAGATCATATACAGACTGCTGCAAGCTACCACGCCATAGCAATAGCTCTTTCATTGATGGAAGCATATTCTCTGAGTGTGCAACATGAGCAAACTACACTTAAGATACTTCAAGCAAAGCTTGGATCAGAAGATCTTCGAACACAGGATGCTGCTGCATGGTTAGAATATTTTGAATCAAAAGCTATAGAGCAGCAAGAAGCAGCTAAAAATGGAACTCCGAAGCCAGATGCTTCCATTGCAATTAAAGGTCACCTTAGTGTGTCAGATCTCCTGGATTTTATTAGTCCTGATCAGGATTCAAAAGGAAATGATGCTCAGAGAAAACAGAGGCGTGCCAAGATAGTCCCAGTAAGTGATAACAATCATCAAGAAGAGCATGATGAAACAAAAGTTGTTGAGGACATTCTCTTTGATGACTCAAAAAATGCTACAAGCGTGGTAGAAGGCATTACACAAGAAAATAATGTCACTCTTGATTATAAAGAACTGAAAGAAAATGGTGATTTGACTAGGTACAGGCAAGTGATAAGTGAGGCTGTTGAGGAGACATCATCTGATGAAGGTTGGCAAGAAGCAGGTTCGAAAGGACGCTCAGGAAACACTTCTAATCGCAAGTTTGGACGCAGACAGCGACCTCATGTATCAAAGCTCAGCATTAGCAGATCTGCAAGTTACAGTTTTAGGGAAGGCAGTTATAGGAATGACATTACTTCGCCACAAAAAGCAGCTCCGAAAGTCCCTTCAGCCATGTTATCTCCATCTAGACAATTGAAAGCTCAAAACTTAACTTCAAGCGAGGATTCTGCTAATCAATCAATTAAAGCTTCTGTGTCCAAAGTTTCCTATCCTCCAACATCTCTAAGTTCTTTGGCTTCAAAATCTATATCTTACAAAGAAGTGGCTCTAGCACCACCAGGTACAGTTTTAAAGCCGATGTTGGAGAAAGCTGAAATCGACCAAGTAAAGGCTGAAAACGAAACATGCAGTAGTCCACTTGTGATGTCAATAAATGAAGGTACTTGCCAAAGTTCCATAGTTGATACAGTTTCACCGCATGATGAAATAGAGGGAACTAATGAAATTGAGCCAGAGCAAGAAAATTCCGCATCAGAAAATGAGAATGTTTCCCTTGATTTCGATCAGGCAAAACCTGCAGAAACAAATAGTAGTAAGCTTTCAGCCACAGCGAAACCATTCAATCCAGGAATGTTGCCCATATCTCCACATTTGAATTCTGTTTCGATGACAAGCATATATGATGCAAATGTTAGTCAAGCAATGCTTGTGGAACCTGTGCTTCCTCCTGCTACTGCCAGGGTCCCTTGTGGGCCTAGATCACCTCTATATTACAGATCCAACTATACTTTTCGAATGAAACATGGTTTTACCAAATACAATACCTCTATAAGGGAAAGAGGCGGATTAGGAGCTGCAAGAATCATGAATCCACATGCACCTGAGTTTGTTCCGAGAAGTGCTTCTCAAAATGAAACTGGTGATGCCAGTTCGAATGTTTCCAGTGGGCATAAGCCGTCTGAAGTAGGCGCGGAAAAAAACAATAAGCTAGATGAAACATTTGTGCAAGTCAAGGATAGTTCCTCAAAACACAGCATTTCTGAATCTGAGAAGTCAGAGATAGCAAGGCAGATACTGCTCAGTTTTCTTGTGAAATCTGCTAAGCAAAACATTGATTCTGTGGATGAATCTTATGTTAGTGAAGGAAAGCATGAGAACTTGGAAAATTCTTCTGATGCAATAGCCAAAGACAGTGCCATCATAAAAATCATGCATGGGAAGGAAGAAAAGAATAAGATGATTCCTCATTCAAGTGGTAATAGTAAAGAAGAGAGGGAAGATGTTGATGCAACTAGGAAAAAGAATGGAGATGGTGAAGGATTTATAGTTGTCACAAAGAGGAGAAAAAACAAGCAGAAGATTTCAAATGGAGTCACAGAATTGTACAACCAGCAATCTATATTGGCTTCAGTTAGATGA 5067 0.4052 MAPRSGKGKSNKAKAEKKKKEEKAVAPSLVDITVVTPYDSHLVLKGISTDKMLDVRRLLAVKVETCHFTNYSLSHEVKGQRLNERVEVVTLKPCVIRMVEEEYKEEGDAISHVRRVLDIMACTTRFGKPKRGLSSPESKPKKNGKAQNEKKSNGSSEKPVSTISENVGMVAIHPTPKLSDFYEFFSFSHLSPPILYLKKCELKNEVDKGKGDYFLLQVKISNGKVIEVVASKKGFYCVGGKHSLQSYTLVDLLQQLSRGFANAYGSLMKAFLEHNKFGNLPYGFRANTWLVPPSVADSPLNFTALPAEDENWGGNGGGHGRNSEHDLRSWATDFAILASLPCKTEEERVVRDRKAFLLHNQFVDTSIFKAVAAIQYMMESKSNLKKELNSTPGSVLHEDHVGDLSIVVKRDIGDGTNKYDAISNEPSPHKEDAQKNLIKGLKAQENVIVHDTSSLAVVVVHHCGYTATVKVVGNLNKKKLNDQDIEIDDQPDGGANSLNINSLRRLLHKSGVVPSEGTLSSISNSDDFDASEDVVRKVVQECLEKIKEEPDVSKRSIRWELVSCWMQHLQKQDTSTDSSSTNKEDVNDVEQAVKGLGKQFKLLKRREKKPSSQDNTDSSSGNMNVCTDKVEPNNDDLSSSTELEKLLSKEAFLRLKESGTGLHLKSVNELINMAHKFYDDVALPKLATDFGSLELSPVDGRTLTDFMHLRGLQMRSLGEVVKLADSLPHIQSLGIHEMITRAFKHLLKAVIASVDNVADFSPVIASTLNFLLGGGSGQIPGDGHNLRIQWLRIFLAKRFGWTLNDEFQHLRKLSILRGLCHKVGLELFPRDYDMESPKPFGKYDIISLVPVCKYVGCSSIDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMAVYGPYHRTTASAYSLLAVVLYHTGDFNQAAIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVQVALRYLHEALKCNKRLLGEDHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGSEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKPDASIAIKGHLSVSDLLDFISPDQDSKGNDAQRKQRRAKIVPVSDNNHQEEHDETKVVEDILFDDSKNATSVVEGITQENNVTLDYKELKENGDLTRYRQVISEAVEETSSDEGWQEAGSKGRSGNTSNRKFGRRQRPHVSKLSISRSASYSFREGSYRNDITSPQKAAPKVPSAMLSPSRQLKAQNLTSSEDSANQSIKASVSKVSYPPTSLSSLASKSISYKEVALAPPGTVLKPMLEKAEIDQVKAENETCSSPLVMSINEGTCQSSIVDTVSPHDEIEGTNEIEPEQENSASENENVSLDFDQAKPAETNSSKLSATAKPFNPGMLPISPHLNSVSMTSIYDANVSQAMLVEPVLPPATARVPCGPRSPLYYRSNYTFRMKHGFTKYNTSIRERGGLGAARIMNPHAPEFVPRSASQNETGDASSNVSSGHKPSEVGAEKNNKLDETFVQVKDSSSKHSISESEKSEIARQILLSFLVKSAKQNIDSVDESYVSEGKHENLENSSDAIAKDSAIIKIMHGKEEKNKMIPHSSGNSKEEREDVDATRKKNGDGEGFIVVTKRRKNKQKISNGVTELYNQQSILASVR 1688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0216 1688 MobiDBLite consensus disorder prediction 1510 1547 - -
Lal18g0216 1688 ProSiteProfiles TPR repeat profile. 904 937 IPR019734 GO:0005515
Lal18g0216 1688 MobiDBLite consensus disorder prediction 1 23 - -
Lal18g0216 1688 ProSiteProfiles Clueless (Clu) domain profile. 308 580 IPR025697 -
Lal18g0216 1688 Gene3D Tetratricopeptide repeat domain 869 1106 IPR011990 GO:0005515
Lal18g0216 1688 SUPERFAMILY TPR-like 941 1065 IPR011990 GO:0005515
Lal18g0216 1688 MobiDBLite consensus disorder prediction 1513 1534 - -
Lal18g0216 1688 MobiDBLite consensus disorder prediction 1277 1294 - -
Lal18g0216 1688 MobiDBLite consensus disorder prediction 132 152 - -
Lal18g0216 1688 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1684 - -
Lal18g0216 1688 MobiDBLite consensus disorder prediction 571 590 - -
Lal18g0216 1688 SUPERFAMILY TPR-like 870 973 IPR011990 GO:0005515
Lal18g0216 1688 Pfam Mitochondrial function, CLU-N-term 49 119 IPR028275 -
Lal18g0216 1688 MobiDBLite consensus disorder prediction 1627 1657 - -
Lal18g0216 1688 MobiDBLite consensus disorder prediction 1240 1262 - -
Lal18g0216 1688 Pfam Translation initiation factor eIF3 subunit 135 695 776 IPR033646 -
Lal18g0216 1688 Pfam Tetratricopeptide repeat 903 973 - -
Lal18g0216 1688 Pfam Tetratricopeptide repeat 987 1061 - -
Lal18g0216 1688 MobiDBLite consensus disorder prediction 604 640 - -
Lal18g0216 1688 MobiDBLite consensus disorder prediction 1203 1294 - -
Lal18g0216 1688 SUPERFAMILY Hypothetical protein c14orf129, hspc210 210 274 IPR023231 -
Lal18g0216 1688 MobiDBLite consensus disorder prediction 1203 1225 - -
Lal18g0216 1688 SMART tpr_5 988 1021 IPR019734 GO:0005515
Lal18g0216 1688 SMART tpr_5 946 979 IPR019734 GO:0005515
Lal18g0216 1688 SMART tpr_5 904 937 IPR019734 GO:0005515
Lal18g0216 1688 MobiDBLite consensus disorder prediction 127 160 - -
Lal18g0216 1688 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1684 IPR027523 GO:0006996
Lal18g0216 1688 MobiDBLite consensus disorder prediction 614 640 - -
Lal18g0216 1688 CDD CLU-central 697 834 IPR033646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0216 Lal-Chr18 1777868 1790421 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0216 K03255 - gmx:100801625 2494.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0216 18 1777868 1790421 Lal18g0216 18 1777868 1790421 ECH