Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal18g0209 | ATGAAAATCAATTTGAAGAGCAGTGGTTGTGTTGGACGCTATAGAGAACCCACACTAAATACTGATTTGGCTGTGGCGTCAGAAGTTCCGATAAAACAAGATAAGCCAGTAAAGAAATCAAGCACATCAGAGGATTTCTGGACGACCAGTACACATGACATGGACAACAGTGCTGTACAGTCACAGGGAAGCATCTCATCAACCAGTCAAACGAATCAAGTCGCGGCTCCTCATGGTGGTTCTTGCAAAACCGGCAACCACACTGAATATGTAAATCACGGTCGCAATCTCTGGAATCAAACTCGGCAACATTGGGTTGGAAATAAAAAGCCAGAGTCTCAAACACAACAATTGCGAGAACCTAAATTGAGTTGGAATGCAACATATGAAAGTTTACTGGCGAACAACAAGCCGTTTCGTCAGCCCATCCCTCTACCTGAAATGGTAGATTTTCTTGTGGACATATGGGAACAAGAGGGTCTATATGACTGA | 492 | 0.435 | MKINLKSSGCVGRYREPTLNTDLAVASEVPIKQDKPVKKSSTSEDFWTTSTHDMDNSAVQSQGSISSTSQTNQVAAPHGGSCKTGNHTEYVNHGRNLWNQTRQHWVGNKKPESQTQQLREPKLSWNATYESLLANNKPFRQPIPLPEMVDFLVDIWEQEGLYD | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal18g0209 | 163 | MobiDBLite | consensus disorder prediction | 33 | 96 | - | - | |
| Lal18g0209 | 163 | Pfam | Protein of unknown function (DUF4050) | 122 | 163 | IPR025124 | - | |
| Lal18g0209 | 163 | Pfam | Protein of unknown function (DUF4050) | 50 | 121 | IPR025124 | - | |
| Lal18g0209 | 163 | PANTHER | DUF4050 FAMILY PROTEIN | 5 | 163 | - | - | |
| Lal18g0209 | 163 | PANTHER | OS07G0479600 PROTEIN | 5 | 163 | - | - | |
| Lal18g0209 | 163 | MobiDBLite | consensus disorder prediction | 42 | 96 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal18g0209 | Lal-Chr18 | 1742882 | 1746062 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal18g0209 | - | - | mtr:MTR_4g010330 | 221.861 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal7g1261 | 7 | 18099281 | 18101943 | Lal18g0209 | 18 | 1742882 | 1746062 | ECH | |
| Lal19g1381 | 19 | 16624731 | 16629499 | Lal18g0209 | 18 | 1742882 | 1746062 | ECH | |
| Lal4g1291 | 4 | 16967852 | 16971486 | Lal18g0209 | 18 | 1742882 | 1746062 | ECH | |
| Lal21g1059 | 21 | 12686649 | 12689275 | Lal18g0209 | 18 | 1742882 | 1746062 | ECH | |
| Lal18g0209 | 18 | 1742882 | 1746062 | Lal18g0209 | 18 | 1742882 | 1746062 | ECH | |
| Lal20g1213 | 20 | 16644847 | 16647685 | Lal18g0209 | 18 | 1742882 | 1746062 | LSH | |
| Lal1g1256 | 1 | 13827813 | 13831357 | Lal18g0209 | 18 | 1742882 | 1746062 | LSH |