Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0178 ATGGAGTGGTTTAGTGGAAAAAACACTTGGGGGAACTTCCCTGATTTGGCAGGGGCGGTGAATAAGCTTCAGGAGAGTGTTAAAACTATCGAGAAGAATTTCGATAATGCTCTTGGGTTTGAGGAGAATGGTGAATCCAGCACTGAAGGATCTTGGCCCTTACCCCGTGACCCGAAAGCCCTGTTTAATCCTGTTATGGCATTTATGGGAAACAATGATGAGGAAAGTGCTGAAGAAACATCTGAAAAACTTGAATCCTCTCAACAAGAATCTGGAATTGAGAAATCATTTGAAAAAACCGACTCTCCAGATTTTATACCTGTGGCTGAGAGAAAAGGAGATTCTGAAACCGATAACACAGCCGGTGTTACAACTCCAGATCATGTACCTGTGTTTGAGAGAAAACAAGATTTTGAAACTGATAACACAGCGCAGAGTATAACTGAAGAATCCACTGTTTCAGAAGAAAATGAAGTGGTTAAGGTAGAAGCAGACCCTGAGAAGACAGTGTCAGCAGATGAAACAGGTACTAAGAATTTGGACCATGGAGAGACAGAAGACCATTTGCCTGAGATGCCTGTTGAATTGTCTGAATCCAACGTTCAGAAGGCTGGGAGCTTGGACTCTGTTGTCACTCATCCAGAGAATGAGACTGCTGAAGTGGAAACCTCAAGTCCACTGTCCATGCAATCTAAGCCTATCGATATTACGGAGGATCAAGTTGAGAGGAGTACTAGTGGTCCTGCTGAGTCACATACTATAAGCGATGTGCAAGAAACATTTCAAGTTGAGACAGATGAAGAGAGTAAAAATAAAGAGAGGATGCAAACACAAGAAAGCGCTGAGAGAGTTTCTTCCATTCAACCCAAGACATTTGGTGAAAGCGAGAAAATAGACGAGGCTGATACTTCTGTTCTACATTCTACAGCCACTGAGGAAACTGAGAGTGTTGATCAACCATACAAAGAACAACTGTCCAGTGCAAGCCCGTCAAATGAATCTTCTGAGCTGATATCTGAATTGGTTTTGCGTGAAAATGAAGCAACTGTTAAAGAAAATGAAGGGGACCATGTAGCCAATGACGTTGAAAATGACATGAAGAAGTTGCATTTGAGTTCTGTAACAAATATGTCTGATTCAGATTCTATGGATGAGCTGGAGAGGGTGAAGAAAGAGATGAAAACAATGGAAGCTACACTACAAGGTGCTGCAAGACAAGCTCAGGCTAAAGCTGATGAGATTGCAAAACTGATGAATGAAAATGAACAATTAAAAGCTGCAATTGAGGACTTGAAGATAAAATCAAATGAGGCAGAAATTGAGTATTTGCGAGAAGAATACCATCAAAGGGTTTCAACTCTTGAGAGAAAGGTATATGCTCTCACTAAGGAAAGGGATACGCTTCGCCGAGAGCAGAACAAAAAAAGTGATGCAGCTGTTCTCTTGAAGGAAAAGGATGAAATAATTACTCAAGTTATGGCAGAAGGTAGAGCAGTCAGAAACCAAATCTATATCTTCACTACTGATACTTTACTGGATGTAGTCTTTTTAGGTGAAGAGCTTTCCAAAAAGCAGGCTGCTCAGGAATCTACCATTAGGAAACTAAGGGCTCAGGTTAGAGAGCTAGAGGAGGAGAAGAAAGGTTTGGATACTCAACTTCAGGTGGAAGAAAATAAAGTAGAAAGTATCAGGAGAGACAAGACAGCTACGGAGACGATGTTACAAGAAACAATTGAAAAACATGAAACAGAACTTGCAGCACAGAAGGATTATTATGCTAATGCTTTAGCTGCTGCTAAGGAGGCTGAAGTACTAGCGGAGGCACGTGCCAACAATGAAGCAAGAACTGAGCTGGAGAGTCTTCTAAGAGAGGCAGAGGAACGCGAATCTATGTTGGTCCATGCTCTTGAAGAATTAAGGCAAACATTGACTATAAAGGAACAGCAGGCAGCCTCGAAAGAAGATATACTTCGCCGAGACATTGAAGATCTTCAAAAACGCTACCAGGCAAGTGAAAGACGGTGTGAGGAACTGGTAACCCAAGTTCCAGAATCTACAAGGCCTCTTTTAAGGCAAATTGAAGCCATGCAGGAAGCAAATGGCAGAAAAGAAGAAGCTTGGGCTGTTGTTGAAAGAACTCTCAATTCTAGACATCAGGAAGCAGAGGCTAAAGCTGCAGGTGCTGAAGAAAGAGAGCGCTCTGTGAATGACCGCTTATCTCAAACCTTGTCTCGAATTAATGTCGTTGATGCTCAGATTTCATGTCTTAGAGCCGAACAGACTCAGTTAAGTAGGACACTTGAAAAGGAGAGACAAAGGGCAGCTGAACATAGGCAGGAATACCTTGCTGCAAAGGAGGAAGCTGACACTCAAGGAGGCCGTGCAAGACAATTAGAGGAAGAGATTAAAGAGATTAGGAAGAAACATAAGCAAGAGTTACAGGAGGCATTGACACATAGGGAACTTCTACAACAGGAGATAGAAAGAGAAAAGGCTGCTCGATCTGAGCTGGAGAGGACTGCTAATGTTCAATCTGCTCCAATATCAGATCAAACTAGCATAACAAGGCAAAATTCTGCTTTTGATAAAGGCAACCTATCTCGAAAAGTCGCTAGTGCAAGCTCTCTGGCAAGCATGGAAGAAAGCATCTTTCTGCAAGCATCATTGGACTCATCCAACGGTTTCTCTGAGAGGAGGAACCCTAGAGATCCAAGCATGAGTTCATACTACATGAAGAGCATGACATCCAGTTCTTATGAATCTGCACTTCGTCAGAAGGAGGGTGAACTTGCTTCATATATGTCACGATTGGCATCAATGGAATCTATCCGTGATTCCCTTGCTGAGGAGTTGGTCCAAATGACAGAACAGTGTGAAAAGTTGCGCAAGGAGGCTACCTTTTTACCCGGCTTACGAGCAGAGCTAGAAGCTCTGAGGAAGCGGCATTCTGCTGCATTGGAGTTGATGGGCGAACGTGATGAAGAGCTGGAAGAACTTCGTGCCGATATTGTTGATGTGAAGGAAATGTACAGAGAACAGGTCAACATGCTTGTGAATAAGAGTACATATTCAAACTTGAGAAAGTCCATGGAATCTTTTGATGGAGATGGTGTATTGGATTTATTTTTGGTGTGGGTATTTGTGATGATGCAGAAAGAAATTGAGATGGATGACCCTTCCAATGTTGAATTAACCCAAATAGTTACAAAAGATATTGAAGAAGGGAATGCTGGCCAAGAGTTTGCTGCTTTATCCTTAAAGGGTATCCGTGTAGTTAAGGCTCACAAAGGTTTCATGCTTTGTCACTTCATCGTAGATAATGACTTATCGGATGAAAATGGAAATTGGCATGTGGGAGCCATAGCAACATTAGTAGACATCATTGGAAGCAGTGTCTCATACACTTTTACTTCATATCATCAAGTCACTGTTGATTTAAGTATATCATACTATTCAACAGCAAAGGTTCAGGAGGAGGTTGAAGTGGAGGCAAAGGTTATAGGAAAGAAGGAGAAATTGATTGCTGTAATTGTACAAGTCAGAAAAAAGGAGAATAGAGAATTGGTTGCTATAGGAAAGTTGTGGTTTTCATCAACTATAAGGGATTCACAATATCAACTCAGTAAACTCTAA 3633 0.4176 MEWFSGKNTWGNFPDLAGAVNKLQESVKTIEKNFDNALGFEENGESSTEGSWPLPRDPKALFNPVMAFMGNNDEESAEETSEKLESSQQESGIEKSFEKTDSPDFIPVAERKGDSETDNTAGVTTPDHVPVFERKQDFETDNTAQSITEESTVSEENEVVKVEADPEKTVSADETGTKNLDHGETEDHLPEMPVELSESNVQKAGSLDSVVTHPENETAEVETSSPLSMQSKPIDITEDQVERSTSGPAESHTISDVQETFQVETDEESKNKERMQTQESAERVSSIQPKTFGESEKIDEADTSVLHSTATEETESVDQPYKEQLSSASPSNESSELISELVLRENEATVKENEGDHVANDVENDMKKLHLSSVTNMSDSDSMDELERVKKEMKTMEATLQGAARQAQAKADEIAKLMNENEQLKAAIEDLKIKSNEAEIEYLREEYHQRVSTLERKVYALTKERDTLRREQNKKSDAAVLLKEKDEIITQVMAEGRAVRNQIYIFTTDTLLDVVFLGEELSKKQAAQESTIRKLRAQVRELEEEKKGLDTQLQVEENKVESIRRDKTATETMLQETIEKHETELAAQKDYYANALAAAKEAEVLAEARANNEARTELESLLREAEERESMLVHALEELRQTLTIKEQQAASKEDILRRDIEDLQKRYQASERRCEELVTQVPESTRPLLRQIEAMQEANGRKEEAWAVVERTLNSRHQEAEAKAAGAEERERSVNDRLSQTLSRINVVDAQISCLRAEQTQLSRTLEKERQRAAEHRQEYLAAKEEADTQGGRARQLEEEIKEIRKKHKQELQEALTHRELLQQEIEREKAARSELERTANVQSAPISDQTSITRQNSAFDKGNLSRKVASASSLASMEESIFLQASLDSSNGFSERRNPRDPSMSSYYMKSMTSSSYESALRQKEGELASYMSRLASMESIRDSLAEELVQMTEQCEKLRKEATFLPGLRAELEALRKRHSAALELMGERDEELEELRADIVDVKEMYREQVNMLVNKSTYSNLRKSMESFDGDGVLDLFLVWVFVMMQKEIEMDDPSNVELTQIVTKDIEEGNAGQEFAALSLKGIRVVKAHKGFMLCHFIVDNDLSDENGNWHVGAIATLVDIIGSSVSYTFTSYHQVTVDLSISYYSTAKVQEEVEVEAKVIGKKEKLIAVIVQVRKKENRELVAIGKLWFSSTIRDSQYQLSKL 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0178 1210 Coils Coil 451 471 - -
Lal18g0178 1210 CDD PaaI_thioesterase 1088 1196 - -
Lal18g0178 1210 Pfam TATA element modulatory factor 1 TATA binding 907 1017 IPR022091 -
Lal18g0178 1210 MobiDBLite consensus disorder prediction 70 338 - -
Lal18g0178 1210 MobiDBLite consensus disorder prediction 81 117 - -
Lal18g0178 1210 PANTHER GOLGIN CANDIDATE 5 1 499 - -
Lal18g0178 1210 PANTHER GOLGIN CANDIDATE 5 518 1024 - -
Lal18g0178 1210 Coils Coil 937 964 - -
Lal18g0178 1210 Coils Coil 711 738 - -
Lal18g0178 1210 MobiDBLite consensus disorder prediction 199 260 - -
Lal18g0178 1210 Coils Coil 753 840 - -
Lal18g0178 1210 MobiDBLite consensus disorder prediction 263 279 - -
Lal18g0178 1210 Coils Coil 996 1016 - -
Lal18g0178 1210 Coils Coil 386 441 - -
Lal18g0178 1210 Coils Coil 608 681 - -
Lal18g0178 1210 MobiDBLite consensus disorder prediction 838 866 - -
Lal18g0178 1210 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 1085 1196 IPR029069 -
Lal18g0178 1210 MobiDBLite consensus disorder prediction 304 338 - -
Lal18g0178 1210 Pfam Thioesterase superfamily 1113 1187 IPR006683 -
Lal18g0178 1210 MobiDBLite consensus disorder prediction 833 866 - -
Lal18g0178 1210 Gene3D Hotdog Thioesterase 1062 1200 - -
Lal18g0178 1210 MobiDBLite consensus disorder prediction 154 193 - -
Lal18g0178 1210 Coils Coil 525 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0178 Lal-Chr18 1455898 1469000 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0178 K20286 - gmx:100807759 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1320 1 14931957 14933415 Lal18g0178 18 1455898 1469000 LSH