Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0158 ATGATGTCTAGGTTTGAAGAAGGGAAGGATCTTGCTACCACTTTAAGGACTAGTCCCTCTAGGCCATTCCCTTTTAGACTTTTACAGTTCTTTTTGCTCTTTTTGGTTATTGGCATTGGTGCTTCGATTCTTAGTATGTACATGATTCGGCATTTCGGTATTCACAATGTGGCTTTGGTACATTCTACTTTTATGCCTTGCTTTCAGCAGCCAGGTGCTACCATTGGAAGTTGGATTAGGCCTGCATCCATTTTGATGCATACTATGAATGACAGTGAACTATTTTGGAGGGCTTCTTTTGTTCCTAGGATCAAGAGTTATCCTTTTAAGAGAGTTCCTAAGATGGCGTTCATGTTCTTGACGAAGGGACCCTTGCCAATGGCGCCACTCTGGGAGAAATTCTTTGAAGGGCATGAAGGGCTTTATTCCATCTATGTTCATTCACTGCCATCTTACACTGCTGATTTTTCGCAATCATCGGTGTTTTATAAGAGGCAGATACCTAGCCAGGTGGCAGAGTGGGGAATGATGAGCATGTGTGATGCCGAAAGAAGACTCTTGGCTAATGCATTGCTTGATATCTCAAATGAATGGTTCATCCTCCTCTCCGAGTCCTGCATTCCTCTCCAGAACTTCAGCATCATCTACCGTTACATATCACGGTCACGGTATAGCTTTATGGGTGCAATTGATGAACCTGGCCCTTATGGCAGAGGACGCTACGATGAAAACATGGCACCTGAGATTAACTTTACTGACTGGCGTAAGGGATCTCAGTGGTTCGAAATTAACCGAGAACTTGCGGTTAGGATAGTTGAAGACACTACTTATTACCCTAAGCTCAAAGAATTCTGCATTCCTCACAAATGCTATGTCGATGAGCACTATTTCCAAACGATGTTGACAATAAATACGCCTCATCTTTTGGCAAATCGGAGCCTCACTTATGTGGATTGGTCAAGGGGTGGTGCTCACCCAGCTACCTTCGGAAAGGATGATATCAAAGAGGAATTCTTCAACAAAATTTTGCAAAATCAGACTTGTCTTTATAATAACCAGCCATCTTCCCTTTGTTTCTTATTCGCGAGAAAATTTGCACCTAATTCTTTGGTTGCTCTTTTAAAAATAGCGCCGGAAGTTTTCGGAATTTGA 1152 0.4245 MMSRFEEGKDLATTLRTSPSRPFPFRLLQFFLLFLVIGIGASILSMYMIRHFGIHNVALVHSTFMPCFQQPGATIGSWIRPASILMHTMNDSELFWRASFVPRIKSYPFKRVPKMAFMFLTKGPLPMAPLWEKFFEGHEGLYSIYVHSLPSYTADFSQSSVFYKRQIPSQVAEWGMMSMCDAERRLLANALLDISNEWFILLSESCIPLQNFSIIYRYISRSRYSFMGAIDEPGPYGRGRYDENMAPEINFTDWRKGSQWFEINRELAVRIVEDTTYYPKLKEFCIPHKCYVDEHYFQTMLTINTPHLLANRSLTYVDWSRGGAHPATFGKDDIKEEFFNKILQNQTCLYNNQPSSLCFLFARKFAPNSLVALLKIAPEVFGI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0158 383 Pfam Core-2/I-Branching enzyme 115 342 IPR003406 GO:0016020|GO:0016757
Lal18g0158 383 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 5 377 IPR044174 GO:0016757
Lal18g0158 383 PANTHER - 5 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0158 Lal-Chr18 1268932 1271585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0158 - - gmx:100793448 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0158 18 1268932 1271585 Lal18g0158 18 1268932 1271585 ECH
Lal20g1120 20 15433914 15437076 Lal18g0158 18 1268932 1271585 LSH