Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0150 ATGGCAACCTATGGAACAATCCCAACATCACCAACATCACCATCTTCCATACCCAACAACCTTAACTACATCAAACATGCAACACAAACAATCAAAGATGGCCTTGGAACTCGCCACCCTTGGAACCTCATGTTCAACCCTAGTTCCTTCAATGTCCCATCTGGGATATCCTCCACCTTGTCTCGAATTCGATTTAACGTATCATTTTTCTGCATGAACTACGCCATTGTGATTCTACTAACCTTGTTTCTAAGCCTTCTATGGCGCCCTATATCTCTAATTGTCTTCACACTTGTTATGGCTGCATGGCTCTATCTTTACTTCCTACGTGACCAACCACTTGTCCTTGTTGGACGTATTGTTGATGATCATGTTGTGCTTGTTTTCATGGCTGTGGTCACGGTGGCGCTGCTGCTTCTGACACGTGCTAGTGTTAATATTCTGGTGGGGGTTTTGGCTGGGGTGGTGGTTATGGTGGTGCATGCAATATATAGGAAGATAGATGATTTGTATTTGGATGAAGAGGAAGGGTTGGTGAACAATGTTGTTGATGGTGCTACTTCTTGA 567 0.4392 MATYGTIPTSPTSPSSIPNNLNYIKHATQTIKDGLGTRHPWNLMFNPSSFNVPSGISSTLSRIRFNVSFFCMNYAIVILLTLFLSLLWRPISLIVFTLVMAAWLYLYFLRDQPLVLVGRIVDDHVVLVFMAVVTVALLLLTRASVNILVGVLAGVVVMVVHAIYRKIDDLYLDEEEGLVNNVVDGATS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0150 188 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 177 IPR004895 -
Lal18g0150 188 Pfam PRA1 family protein 35 175 IPR004895 -
Lal18g0150 188 PANTHER PRA1 FAMILY PROTEIN F2 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0150 Lal-Chr18 1195573 1196139 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0150 K20359 - gmx:100789765 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0150 18 1195573 1196139 Lal18g0150 18 1195573 1196139 ECH
Lal20g1097 20 15141831 15142373 Lal18g0150 18 1195573 1196139 LSH
Lal25g0322 25 2202880 2203431 Lal18g0150 18 1195573 1196139 PCT
Lal18g0150 18 1195573 1196139 Lal25g0322 25 2202880 2203431 PCT