Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0140 ATGACTATATCTTCAATATGGGTGTTGACCTTTTTTTCTTTGTTTTATGGTAATGGTGTTCTTCCTATTGAAGCTACCCACCATGTTTATAGAAAACTTCAGAATCTATCATCTGATTCTTACAAACAACCTTATAGAACTGCTTATCACTTTCAACCTCCAAAGAATTGGATAAATGGACCATTGAGATACAAAGGATTTTATCATTTGTTCTATCAATACAACCCTAAAGGTGTAGTTTGGGGAAATATTGTGTGGGCCCACTCAGTATCAAAGGATCTTGTAAATTGGGCCTCACTCGATCCTGCCATCTTTCCATCTCAGCCGTCAGATATCAATGGATGTTGGTCAGGATCAGCCACATTGCTTCATGGGGGCAAACCAGTCATTTTATACACAGGAATTAACCCTTTGAATCAACAAGTTCAAAACTTAGCCTACCCTAAAAACTTGTCTGACCCATTACTAAGGGAATGGGTTAAGTCACCCAAAAATCCACTAATGGCACCAACTAGTGCTAATAAGATAAATGCAAGTTCTTTTAGGGACCCCACTACTTCTTGGCTAGGGAAAGATGGGTATTGGAGGGTACTAATTGGGAGCAAAAGGAACACTATAGGGTTAGCAATTTTGTATAAAAGCAAGGATTTTGTTAATTGGGCTAAGGCTAAATACCCATTATATTCAGGCCAAGGCACTGGAATGTGGGAGTGCCCTGATTTTTTCCCAATTCTAAATGATAGTTCAATTGGTGTTGACACATCTTTTAATAGTGATAATGTTAGGCATGTGCTTAAGGTTAGTTTAGATGATAAAAAACATGATTACTATATGATTGGGAGTTATGATATAGTCAAGGATAAATTTATCCCTGATAAAGCATTCAAGGATAGTAAATCATTTTTAAGATATGATTATGGAAAATATTATGCATCAAAAACTTTCTTTGATGATGGAAAGAATAGAAGGGTATTGCTTGGTTGGGTCAATGAGTCCTCAATTGTTGCTCATGATATTAAGAAAGGATGGTCTGGAATCCATGCAATTCCAAGGGCTATATGGTTACATAAGTCAGGTAAACAATTGGTGCAGTGGCCAGTTGTGGAAATAGAAAAGCTACGTGCAAATCCAGTTAACTGGCCTACTAAACTACTCAAGGGTGGTGACCTGCTTCAAATTAATGGTGTCACACCAGCACAAGCTGATATTGAAATATCATTTGAAGTGAATAAATTAGGAGAGGCTGAAGTATTGGAATATTGGAGAGACCCTCAAAGTCTATGTAGCCAAAAGGGTTCAACCTATAAAAGTGGATTAGGACCTTTTGGTCTATTAGTTTTTGCTTCAAAGGGGTTGCAAGAGTATACATCAGTGTACTTCAAAATATTCAGATACCAACACAAAAATTTGGTGCTATTGTGTAGTGACCAAAGCAGGTCTTCATTGGACAAGAATAATGATAAAACCAATTATGGGATTTTTGTGGATGTGGACCCTCTTCATGAGAAGTTGTCATTGAGAAGCTTGATTGATCACTCTGTCGTGGAGAGTTTTGGAGGAGAAGGAAGAGCTTGCATTACAGCTAGAGTTTATCCGACATTGGCAATCAATGATGAGGCGCAACTATACGCTTTTAATAATGGAAGTGAAGATGTTAAGATAACAAGATTAAGTGCTTGGAGCATGAAGAAAGCACAAATTAATGGAAATTAA 1713 0.3724 MTISSIWVLTFFSLFYGNGVLPIEATHHVYRKLQNLSSDSYKQPYRTAYHFQPPKNWINGPLRYKGFYHLFYQYNPKGVVWGNIVWAHSVSKDLVNWASLDPAIFPSQPSDINGCWSGSATLLHGGKPVILYTGINPLNQQVQNLAYPKNLSDPLLREWVKSPKNPLMAPTSANKINASSFRDPTTSWLGKDGYWRVLIGSKRNTIGLAILYKSKDFVNWAKAKYPLYSGQGTGMWECPDFFPILNDSSIGVDTSFNSDNVRHVLKVSLDDKKHDYYMIGSYDIVKDKFIPDKAFKDSKSFLRYDYGKYYASKTFFDDGKNRRVLLGWVNESSIVAHDIKKGWSGIHAIPRAIWLHKSGKQLVQWPVVEIEKLRANPVNWPTKLLKGGDLLQINGVTPAQADIEISFEVNKLGEAEVLEYWRDPQSLCSQKGSTYKSGLGPFGLLVFASKGLQEYTSVYFKIFRYQHKNLVLLCSDQSRSSLDKNNDKTNYGIFVDVDPLHEKLSLRSLIDHSVVESFGGEGRACITARVYPTLAINDEAQLYAFNNGSEDVKITRLSAWSMKKAQINGN 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0140 570 Gene3D Glycosyl hydrolase domain; family 43 54 376 IPR023296 -
Lal18g0140 570 Gene3D - 377 562 - -
Lal18g0140 570 Pfam Glycosyl hydrolases family 32 C terminal 369 561 IPR013189 -
Lal18g0140 570 SMART glyco_32 50 522 IPR001362 GO:0004553|GO:0005975
Lal18g0140 570 SUPERFAMILY Arabinanase/levansucrase/invertase 40 367 IPR023296 -
Lal18g0140 570 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 568 - -
Lal18g0140 570 SUPERFAMILY Concanavalin A-like lectins/glucanases 366 564 IPR013320 -
Lal18g0140 570 PANTHER CELL-WALL INVERTASE 2 568 - -
Lal18g0140 570 Pfam Glycosyl hydrolases family 32 N-terminal domain 50 366 IPR013148 -
Lal18g0140 570 CDD GH32_Fruct1-like 56 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0140 Lal-Chr18 1123688 1128282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0140 64 568 Glycoside Hydrolase AT3G13790 65.107 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0140 K01193 - gmx:100776791 960.288