Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0137 ATGTTTTTCCACAAGGGACAAAAGGTGAAGGGGACAGTGGTGTTGATGACAAAGAATGTGTTAGACATAAATGAGTTAACAGGTGCACAAAGTGTTGGAGGTATTGTAAGTGGTGGTTTCAACATTGCTGGTAGTATTGTTGGTGGTTTAGTTGATGCTGCCACTTCTTTCTTGGGTCAATCTATTGCTCTTAAACTCATCAGTGCTACTACTTCTGATGGAAGTGGAAAAGGGAAAGTTGGAAAAGTAGCATACTTGGAGAAACATCTTCCTTCATTACCAAACTTGGGAGCTAAACAAGATGCTTTCAATATTCATTTTGAATGGGATTCTGATTTTGGAATTCCTGGTGCTTTTTATATTCAGAATTTTACTCAATCTGAATTCTTCCTTGTTAGTTTCACACTTGAAGATGTTCCTAATCAAGGAACCATTCACTTTCTATGCAACTCATGGGTTTATAACAAAAAGAAGTATGACACTGATCGCATTTTCTTCGCCAACAAGACATATCTCCCTGGAAAAACACCAGCTCCACTAGTCTATTATAGAGAACAAGAGTTGAAAACTTTAAGAGGCGACGGAAAAGGAGAGCGTAAGGAGTGGGAAAGGATTTATGATTATGATGTCTACAATGATCTCGGTGAACCGGACAAGAATGCAGCCTTGGCTCGTCCTGTTCTTGGAGGATCAGTTGAGTTGCCTTACCCTCGCAGGGGAAGAACCGGCCGAAAACCATCTAGGAAAGATACTAAGAGTGAGAGCAGAAGTGACATTGTTTACCTTCCAAGAGATGAAGCATTTGGTCACTTGAAGTCCTCTGATTTTCTTGTCTATATACTTAAATCTGCGTCTCAAAATGTTATACCGAAGTTGCAATCTGCGATTCGCTTACAATTCAATCAGCCTGAATTTAACAGCTTCGAAGATGTTCGAGGATTGTATGATGGTGGAATTAAGCTTCCTACTAATATACTAAGTGACATTAGCCCAATTCCATTGTTCAAGGAACTCTTCAGAACTGATGGTGAACAAGCCTTAAAGTTTCCAGAACCTAAAGTGATTCAAGTGGAGAAGTCTGCATGGATGACTGATGAAGAATTTGCAAGAGAGATGATTGCTGGAGTGAATCCACACATTATTACAAGACTTCAGGAATTCCCACCAAAGAGCAAGCTTGATACACAAGTCTATGGTGATAATACCAGTACAATAACCAAAGAACACTTGGAGCCAAACTTGGATGGACTCACTGTAGAACAGGCCATTGCAGAAAACAAGTTGTTCATACTTAATCACCATGATCCAATCATTCCATATTTGAGGAAAATAAATGCAACCAACACTCGAAAGGCCTATGCTACGAGAACCATCCTTTTCTTACAAAACAATGGAACATTAAAGCCATTGGCCATTGAGCTAAGTAAGCCACATCCTCAGGGTGATAATTATGGTCCTATTAGTAATGTTTACCTACCAGCAGACCAAGGTGTTGATGGTTCTTTATGGCTACTTGCCAAGGCTTATGTAGTCGTAAACGACTCGTGCTTTCACCAACTTGTCAGCCACTGGTTAAACACTCATGCAGTTGTTGAGCCATTCATCATCGCGACAAATAGGCACCTTAGTGTGGTTCACCCAATTCATAAACTTTTACTTCCACACTATCGCGACACGATGAACATCAACGCACTTGCACGGAATGTGTTGGTCAATGCAGAGGGTATTATTGAGACAACATTCTTGTGGGGGAAATATTCTTTGGAAAATTCTGCTGTTATTTACAAGGATTGGGTTTTCCCTGAGCAAGCACTACCTGCTGATCTTATCAAGAGGGGAGTGGCTGTAGAAGACCCGTCTTCACCCCACGGAATCCGTCTTCTAATAGAGGACTATCCTTATGCTGCTGATGGACTAGAGATATGGGCTGCAATCAAGTCATGGGTCCAAGAATATGTCACTTTCTACTATGATTCAGATGCTGCAATTGCACAAGATGCTGAACTCCAAGCTTTTTGGAAAGAACTTGTAGAGGTGGGTCATGGTGACAAGAAAAATGAGCCGTGGTGGCCGAAGTTGCAAACTCGTGAAGTGTTGATTGAAATTGCCAGTACCCTCATATGGACTGCTTCAGCCCTTCATGCTGCTGTTAACTTTGGACAATATCCGTATGGAGGTTATATCCTCAACCGCCCGACTCTTAGCAGAAGATTCATCCCCGAGAAAGGATCGCCCGAGTATGATGAGCTAGCTAAGAACCCTCAGAAGGTGTTTTTGCAAACAATCACCCCAAAGAATGAGACCCTTACTGACCTTACAATTATAGAGGTCTTGTCAAGGCATGCTTCTGATGAAGTCTACCTTGGACAGAGAGATGGTGGTGACATTTGGACTTCTGATGCACAACCAATTGAGGCCTTTAAGAGGTTTGGTAATAAGTTAGCAGAAATTGAGAAAAAGCTTATAGAGAGGAACAATGATGAGACATTGAGGAACCGTTACGGGCCGGTGAAGATGCCTTACACTCTACTTTATCCTTCCAGTGAGGAAGGATTGACTTTCAGAGGCATTCCAAACAGCATCTCTATCTAA 2592 0.4163 MFFHKGQKVKGTVVLMTKNVLDINELTGAQSVGGIVSGGFNIAGSIVGGLVDAATSFLGQSIALKLISATTSDGSGKGKVGKVAYLEKHLPSLPNLGAKQDAFNIHFEWDSDFGIPGAFYIQNFTQSEFFLVSFTLEDVPNQGTIHFLCNSWVYNKKKYDTDRIFFANKTYLPGKTPAPLVYYREQELKTLRGDGKGERKEWERIYDYDVYNDLGEPDKNAALARPVLGGSVELPYPRRGRTGRKPSRKDTKSESRSDIVYLPRDEAFGHLKSSDFLVYILKSASQNVIPKLQSAIRLQFNQPEFNSFEDVRGLYDGGIKLPTNILSDISPIPLFKELFRTDGEQALKFPEPKVIQVEKSAWMTDEEFAREMIAGVNPHIITRLQEFPPKSKLDTQVYGDNTSTITKEHLEPNLDGLTVEQAIAENKLFILNHHDPIIPYLRKINATNTRKAYATRTILFLQNNGTLKPLAIELSKPHPQGDNYGPISNVYLPADQGVDGSLWLLAKAYVVVNDSCFHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINALARNVLVNAEGIIETTFLWGKYSLENSAVIYKDWVFPEQALPADLIKRGVAVEDPSSPHGIRLLIEDYPYAADGLEIWAAIKSWVQEYVTFYYDSDAAIAQDAELQAFWKELVEVGHGDKKNEPWWPKLQTREVLIEIASTLIWTASALHAAVNFGQYPYGGYILNRPTLSRRFIPEKGSPEYDELAKNPQKVFLQTITPKNETLTDLTIIEVLSRHASDEVYLGQRDGGDIWTSDAQPIEAFKRFGNKLAEIEKKLIERNNDETLRNRYGPVKMPYTLLYPSSEEGLTFRGIPNSISI 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0137 863 Pfam PLAT/LH2 domain 73 166 IPR001024 GO:0005515
Lal18g0137 863 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 7 171 IPR036392 GO:0005515
Lal18g0137 863 Pfam Lipoxygenase 180 846 IPR013819 GO:0016702|GO:0046872
Lal18g0137 863 ProSiteProfiles PLAT domain profile. 40 167 IPR001024 GO:0005515
Lal18g0137 863 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 170 863 IPR013819 GO:0016702|GO:0046872
Lal18g0137 863 Coils Coil 812 832 - -
Lal18g0137 863 ProSitePatterns Lipoxygenases iron-binding region signature 1. 518 532 IPR020833 GO:0016702|GO:0046872
Lal18g0137 863 Gene3D - 172 271 - -
Lal18g0137 863 CDD PLAT_LH2 8 168 IPR042057 -
Lal18g0137 863 SUPERFAMILY Lipoxigenase 173 863 IPR036226 -
Lal18g0137 863 MobiDBLite consensus disorder prediction 235 256 - -
Lal18g0137 863 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 3 863 - -
Lal18g0137 863 Gene3D - 496 862 - -
Lal18g0137 863 Gene3D - 272 360 IPR027433 -
Lal18g0137 863 Gene3D PLAT/LH2 domain 1 171 - -
Lal18g0137 863 PANTHER LIPOXYGENASE 3 863 IPR000907 GO:0016702|GO:0046872
Lal18g0137 863 ProSitePatterns Lipoxygenases iron-binding region signature 2. 545 555 IPR020834 GO:0016702|GO:0046872
Lal18g0137 863 PRINTS Lipoxygenase signature 500 517 IPR013819 GO:0016702|GO:0046872
Lal18g0137 863 PRINTS Lipoxygenase signature 518 535 IPR013819 GO:0016702|GO:0046872
Lal18g0137 863 PRINTS Lipoxygenase signature 538 558 IPR013819 GO:0016702|GO:0046872
Lal18g0137 863 Gene3D - 361 495 - -
Lal18g0137 863 PRINTS Plant lipoxygenase signature 137 155 IPR001246 GO:0016491
Lal18g0137 863 PRINTS Plant lipoxygenase signature 163 184 IPR001246 GO:0016491
Lal18g0137 863 PRINTS Plant lipoxygenase signature 202 218 IPR001246 GO:0016491
Lal18g0137 863 PRINTS Plant lipoxygenase signature 235 254 IPR001246 GO:0016491
Lal18g0137 863 PRINTS Plant lipoxygenase signature 302 323 IPR001246 GO:0016491
Lal18g0137 863 PRINTS Plant lipoxygenase signature 347 363 IPR001246 GO:0016491
Lal18g0137 863 PRINTS Plant lipoxygenase signature 386 405 IPR001246 GO:0016491
Lal18g0137 863 PRINTS Plant lipoxygenase signature 453 477 IPR001246 GO:0016491
Lal18g0137 863 PRINTS Plant lipoxygenase signature 775 789 IPR001246 GO:0016491
Lal18g0137 863 SMART LH2_4 7 168 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0137 Lal-Chr18 1104511 1108234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0137 7 863 Acyl Lipid Metabolism Gene Families AT1G55020 57.422 0.0 1022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0137 K15718 - gmx:100816880 1488.01